FMO04724.5prime Sequence
1033 bp (1033 high quality bases) assembled on 2008-08-08
> FMO04724.5prime
TAACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCTCTG
GAGGATCCGTTTTTCGTGGTCAAGGACGAGGTATTCAAAGCTCTGAACAA
AACCCGCGGCCTCTATCTGCGTTGGCGGGAGCTGGGCGAGAACGGCGGAA
CGGAGGCTGAATGGACCACCACCGAGCTGCGTAACTCGCTACGGAGCATC
GAGTGGGATCTCGAGGACCTCGAGGACACTATCAGCATCGTTGAGAAGAA
TCCAAGCAAGTTTCGGATCGACAACCGCGAACTCTCCAGCCGGCGCCACT
TCATCGACAACACTCGCGATGAGGTCAAGCAGATGAAGGATAAGATGAGC
CTGAACCGGAGCCGGGACAGAGACATCACCGCACACCAGCCGCTGCTCGA
CAACGATCGCCACAGCCCCAATCACAATCATTCCATTGCCATACCCAATT
CGAATTCCAACTCCAACGAGTACCATCAGCATCCACACAACGATCGCACG
TACCTCGTGGAGTGTCCCAACGGCAACTCGCTGATCAATAGCGGCAGTCA
GGTGGCCAATACCATAGCTGGGACCATGTCGGCGGCAGCGGCAGCAGCAT
CCCGCCACAGCGGCACCAAGTACTCCAAGCTGGAGAACGCCCTGGACAGT
CCCAGTCACTATGGGCAGACGCATCACGGCGGCATGGACAGTCCGAGTCA
TAGGTACGTGGGCGAAACAGTGTCCATACAGCAGCGTATGATCCAGGGAC
AGGATGAGCAGCTAGACATGATCAGCGATTCGATTGGTACCCTCAAGACG
GTCTCGCGGCAAATTGGCGTTGAGCTCGATGAGCAGCCGTCATGCTAGAC
GACTTTGGGAACGAGTTCGATACCACGGAGTCCAAGTTGGATACGACCAT
GAAGAAAGTTGCCAAAGTCTTGCACATGAATAATGATAACGACGTGGGCG
CCATTCTCATCCTATCCGGACTGTATGTTGTGATATTTTGTTATTATTTT
GGCAAGCTTTCTAACCATTCGTTGGGCGCGCCG
FMO04724.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx6-RD | 1982 | CG7736-RD | 390..1359 | 41..1001 | 4625 | 99.1 | Plus |
| Syx6-RB | 1361 | CG7736-RB | 175..1108 | 77..1001 | 4445 | 99 | Plus |
| Syx6-RE | 1945 | CG7736-RE | 531..1464 | 77..1001 | 4445 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11220928..11221629 | 235..935 | 3460 | 99.9 | Plus |
| 2R | 25286936 | 2R | 11220464..11220621 | 77..234 | 790 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:24:47 has no hits.
FMO04724.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:29 Download gff for
FMO04724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx6-RD | 387..1362 | 38..1005 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:16:38 Download gff for
FMO04724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx6-RD | 385..1360 | 38..1005 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:11 Download gff for
FMO04724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx6-RD | 387..1362 | 38..1005 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:11 Download gff for
FMO04724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11220464..11220621 | 77..234 | 100 | -> | Plus |
| 2R | 11220928..11221629 | 235..935 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:29 Download gff for
FMO04724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7107969..7108126 | 77..234 | 100 | -> | Plus |
| arm_2R | 7108433..7109134 | 235..935 | 99 | -> | Plus |
