FMO04730.5prime Sequence
532 bp (532 high quality bases) assembled on 2008-08-08
> FMO04730.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTGCGTCCTA
GCTCGCTGCAGGCTGTCGCCATCGCCATCGTCCTGATCTCGTCATCCGCT
TCCGCCGAGGTGGTCAACTTCGAACCATGTCCGGATAGCGTAGACACCTG
TACGATCCAGCAGGTGAGAGTCTCGCCATGTCCGGAGGCCCTCAACAATG
CGGCTTGCAATATCCGCCGGAAGCACAACAGTGAGATGAGCTTCGACTTC
ACGCCGAACTTCGATGCCGACACCCTGGTAGCCAGCTTGGGCTGGGCCAA
GAGCGAGAATGTGGAGCTGCCCCTGCTCACCTTGGACAGCGCCGCCTGCA
AGTACACACCCTGCCCCGTGAGATCCGGAGTGAAACAGACCTACACCACC
CTGGTGCCCATCGAGGCCAAGTTTCCCCTGAGTCCGTACACCATCCGTTG
GGCTCTGAAGGATCCCGTCTCCCAGAAGCGCTGCTGCTTCACCATCGACA
TTAAGGTGGTGCGCGCAAGCTTTCTAGACCAT
FMO04730.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Npc2g-RB | 592 | CG11314-RB | 30..507 | 37..514 | 2390 | 100 | Plus |
Npc2g-RA | 659 | CG11314-RA | 30..507 | 37..514 | 2390 | 100 | Plus |
Npc2h-RC | 597 | CG11315-RC | 78..501 | 91..514 | 875 | 81.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30744757..30745234 | 514..37 | 2390 | 100 | Minus |
3R | 32079331 | 3R | 30745790..30746213 | 514..91 | 875 | 80.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:03:34 has no hits.
FMO04730.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:13 Download gff for
FMO04730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Npc2g-RA | 25..507 | 33..514 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:09:44 Download gff for
FMO04730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11314-RA | 23..505 | 33..514 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:00 Download gff for
FMO04730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Npc2g-RA | 25..507 | 33..514 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:00 Download gff for
FMO04730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30744757..30745239 | 33..514 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:13 Download gff for
FMO04730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26570479..26570961 | 33..514 | 99 | | Minus |