FMO04731.5prime Sequence
969 bp (121 high quality bases) assembled on 2008-08-08
> FMO04731.5prime
TCGTATAGCATACATTATACGAAGTTATCAATCCACATGGATCAAAATGT
CAAGAATGTTGATCTTAAACTGGATAACATTGAGGTTCTGACCATTGGGA
CAACAGCGGAGTTCGTGAATGGCATCCTGGACTTCTTGCTCTATCAACGC
CGGCAAATCCCCTTCGTGTACAAAACATACAAATATTATGTGGATAAATG
GTCAGATGCTGATGAATCGGGAGAATCCAAGGATCAGGAGTCCTTTGCTC
ATTACCAACACAACCACCACCGCTCTAAGGCTAAGGCCACCAAGGAATCT
AATAATGACGTGAGAGAGATCATCCGACAAGCCTTCAGGAGCTCTGAATT
GAAGAGCCTGCGATTTCTTTTTGGCAACAATATGTTCATGCCCTCGGAGG
CCTATACTCTGCACATACCACATGATTCCATATCCAGAGATCACTATTGC
GAGCACCATGCTCTGCCCGAAGGTCGCATCAACCACGCGCTGCTCCGCCT
GCTCACCTGCGAGGAGCTGTACAGGCTATTCTCCACCGAACTAAAAGTCA
CCAACGTGTTTCTAGAAATGGAGCTCCTTACAGACTCCGATCGACCCCAA
GGATCCCATTGTGACTCCTTTAATCTAATCCCAAAGCATATATTAAGCCA
ACTTCCGCGCAACTGCAAGAACATACACCTGCATCTACTGCATTGCAGTG
AAAACACACCGAATGAATTACGCTGCTGCAAGGAGATGGATATTTACCAC
GATCTTGGCGTGCGGAATCTGGATAAATCTGGGGAAGACGTTAGCCAGAC
CAACGAAGAGCATGACGTTTTGAAAGCAGCAAATGAAACCAGCGGTTGGT
GGCAGGTCGAGGTCATAGTTCGCGGTTTCAGAGCTCCTGACACCAAAAAT
CGGGAGATTTGTGGTCTAGCGCACGCTTTCTGACCATTCGTTTGGCGCAC
GGGCACATGTAAGAGACAT
FMO04731.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13599-RA | 1029 | CG13599-RA | 75..959 | 37..920 | 4205 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23932054..23932658 | 317..920 | 2900 | 99 | Plus |
| 3R | 32079331 | 3R | 23931713..23931994 | 37..318 | 1290 | 97.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:36:39 has no hits.
FMO04731.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:47 Download gff for
FMO04731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13599-RA | 75..967 | 37..929 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:14:54 Download gff for
FMO04731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13599-RA | 71..963 | 37..929 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:53 Download gff for
FMO04731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13599-RA | 75..967 | 37..929 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:53 Download gff for
FMO04731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23931713..23931994 | 37..318 | 97 | -> | Plus |
| 3R | 23932056..23932666 | 319..929 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:47 Download gff for
FMO04731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19757435..19757716 | 37..318 | 97 | -> | Plus |
| arm_3R | 19757778..19758388 | 319..929 | 98 | | Plus |
