FMO04732.5prime Sequence
867 bp (867 high quality bases) assembled on 2008-08-08
> FMO04732.5prime
CGTATAGCATACCTTATACGAAGTTATCAGTCGACATGGCTTGTACATGC
GAAGTTATTGGACTGGCCTGCGTGGTGGCTTTAATCCTAAGCGCCACGGC
CAAGGCTCCCTATCAGATGCGCATGTTCTTTATATTTTTTGGAGCTGGTC
TGATAGTCTTTCTGTGCGTGCCCTTTATGATTCTGCGACCGCGAGACTAT
CGAAATGCGCTTTTTCCATCATGGTGCTTCCGGCAGCTTTGCCGCCTGGT
GGGCATAACAATGGAGGTTCGTGGTCTGGAGAATGTCCGTAAGGACCATG
GGGCAGTGGTGATAATGAACCACCAAAGTGCTGTTGATCTTTGCGTTCTG
GCCTATTTGTGGCCTGTGATCGGAAGAGCAACAGTTGTCTCCAAGAAGGA
GGTTCTCTACATCCCATTCTTTGGCATTGGAGCATGGCTCTGGGGTACCC
TATACATCGACCGCTCCCGCAAGACCGACTCGATCAACTCTCTGCAAAAG
GAGGCGAAGGCGATACAGGAGCGCAACTGCAAGCTACTGCTCTTCCCTGA
GGGAACGCGCAACTCCAAGGACTCGTTGCTGCCCTTCAAGAAGGGCTCAT
TCCACATCGCACTGCAGGGCAAGAGCCCCGTTCAGCCGGTGGTCATATCG
AAGTACTCATTCATGGATGACGAGAAAAAGACATTCCGTCCTGGCCACGC
CCTAATCCACATCCTACCCGAGGTGTCCACCGAGAAGTACAAGAGGGAGG
ACGTGCAGCTGCTGATCGACGAATGCCAGTCCCATCATGCAGACGGAGTA
CACAAAGCTGAGCAAAGAAGGCCAAGCCTTGAGCTCAAAGAAACAGGCAG
CAAGCTTTCTAGACCAT
FMO04732.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fu12-RC | 2065 | CG17608-RC | 852..1664 | 36..849 | 4030 | 99.8 | Plus |
| fu12-RD | 1311 | CG17608-RD | 98..910 | 36..849 | 4030 | 99.8 | Plus |
| fu12-RB | 1335 | CG17608-RB | 122..934 | 36..849 | 4030 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8450092..8450728 | 849..212 | 3125 | 99.7 | Minus |
| 2L | 23513712 | 2L | 8450794..8450969 | 211..36 | 880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:57:50 has no hits.
FMO04732.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:48 Download gff for
FMO04732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fu12-RB | 122..934 | 36..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:16:12 Download gff for
FMO04732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fu12-RB | 122..934 | 36..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:45:39 Download gff for
FMO04732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fu12-RB | 122..934 | 36..849 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:45:39 Download gff for
FMO04732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8450092..8450728 | 212..849 | 99 | <- | Minus |
| 2L | 8450794..8450969 | 36..211 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:48 Download gff for
FMO04732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8450092..8450728 | 212..849 | 99 | <- | Minus |
| arm_2L | 8450794..8450969 | 36..211 | 100 | | Minus |
