FMO04747.5prime Sequence
227 bp (227 high quality bases) assembled on 2008-08-08
> FMO04747.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATGATGATG
GCACCACACGATCGCGACTTTGGTCACAGTGGACGTGGCGGTCGCGGAGG
CGATCGAGGCGGCGATGATCGGCGAGGAGGCGGCGGCGGAGGCAATCGCT
TCGGTGGCGGCGGTGGCGGTGGCGATTACCACGGCATAAGGAATGGACGC
GTCGAGAAGCGACGCGATGACCGCGGA
FMO04747.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rm62-RF | 2833 | CG10279-RF | 365..553 | 39..227 | 945 | 100 | Plus |
| Rm62-RB | 3087 | CG10279-RB | 619..807 | 39..227 | 945 | 100 | Plus |
| Rm62-RC | 2849 | CG10279-RC | 381..569 | 39..227 | 945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6004949..6005126 | 227..50 | 890 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:20:38 has no hits.
FMO04747.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:58 Download gff for
FMO04747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rm62-RC | 381..568 | 39..226 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:12:55 Download gff for
FMO04747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rm62-RB | 619..806 | 39..226 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:43 Download gff for
FMO04747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rm62-RC | 381..568 | 39..226 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:43 Download gff for
FMO04747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6004950..6005126 | 50..226 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:58 Download gff for
FMO04747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1830672..1830848 | 50..226 | 100 | <- | Minus |
