FMO04750.5prime Sequence
1222 bp (1059 high quality bases) assembled on 2008-08-08
> FMO04750.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCAGCCAGC
GAAGCGCCACCCGCAGACCCGGCGGTGGAGGTGGCGCCACCAGCGAAGGA
CTCGGAAGACGTCACTCTGGACGCCATCCTGAAGCACCTGGGGCAGTTCG
GACGCTTCCAGCTGATCATATTCCTCCTAATCTGCCTGCCGATGATGTTC
CACGCCATGTTCTCGGTCACATACGTGTTTACCGCTGCCACAGTGACGCA
CAGATGTAGCGTGGAAGAGTGCGATTTGCCTGGAAGCAACTACTACGAGC
CACACACCAATTGGAGTATCCCCAAGAACGGCAAGGATCTGGACTCCTGT
AATCGGTACACCAACTCGGAGCTGCCCCAGTGGAACCATTCTGTGGACAT
TTGCTCGGCCGACCACTTCACAAAAAACAAGGAGGCCTGCGCCCACAACG
AGTTCGTTTTTCGCGACGATGAAGTTACCATTTCCAATGACTTTGGCATT
TTCTGCGATGATGAATGGAAGCTATCTATGGTGGGAACCATAAACAACTT
GGGACAATTCTTCGGCATTCCCATCGGGGGCTTTGTGGCGGATCGATATG
GACGGAGTTTCTCAATCGCTCTCGGCGGAATATTGGGAGCCGTGCTTGGC
GTAATTCGCTCCTTCTCGCCCAGCTACGGTTGGTTCCTTGTGTTCGAGTT
CCTGGACAACATGACCAGCAGTACGTTGTACTCCACCTGTTTCGTGATCG
GGATCGAGCTAGTGGGACCCAAGCGACGCGTGCTGGCGTGCAGTGTGATT
ACGGTCTTTTACGCGGTGGGTGAGGTGCTGCTCGCGATGTCCGCCAAGGC
GTTCCACGATTGGCGGATCCTACTGCGCATCACGTACGGCCCTCGCTGAT
CTTGCTGGCCTACTTTGGGATCCTGCCGGAGAGTGTGCCGCTGGCTGCTT
AGTCAGGCAAGGAGGAGCGGGCCAAGAATATCCTTCAGCGAGCCGCCCAT
GTTGAACAAGCGCGAGCTGCCGGAAAGCGTGCTGGACAGGCTGTGCTGGC
CAATCGGGGACAGTGCAGCAGTCGTCGGAAAACGTTCCCAATTACGAAGG
CCTTTCAGAACTTCAAGTGGGCGCATTGCCTACTGTCTATGCTGAATGTC
CAGGCCTGTTCATACGGATTGAACTATGTTGGCCTTGTAAGGAAACAACT
ACATAATCTCTCCTTAATATAC
FMO04750.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7442-RA | 2085 | CG7442-RA | 260..1353 | 39..1129 | 5035 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21937302..21937790 | 595..1081 | 2050 | 97.4 | Plus |
| 3L | 28110227 | 3L | 21935263..21935504 | 250..491 | 1210 | 100 | Plus |
| 3L | 28110227 | 3L | 21934963..21935177 | 39..253 | 1075 | 100 | Plus |
| 3L | 28110227 | 3L | 21937139..21937242 | 492..595 | 520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:32:03 has no hits.
FMO04750.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:07 Download gff for
FMO04750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7442-RA | 257..1361 | 36..1138 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:11:53 Download gff for
FMO04750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7442-RA | 252..1356 | 36..1138 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:27 Download gff for
FMO04750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7442-RA | 257..1361 | 36..1138 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:27 Download gff for
FMO04750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21934960..21935177 | 36..253 | 99 | -> | Plus |
| 3L | 21935267..21935504 | 254..491 | 100 | -> | Plus |
| 3L | 21937139..21937242 | 492..595 | 100 | -> | Plus |
| 3L | 21937303..21937847 | 596..1138 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:07 Download gff for
FMO04750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21930239..21930342 | 492..595 | 100 | -> | Plus |
| arm_3L | 21930403..21930947 | 596..1138 | 95 | | Plus |
| arm_3L | 21928060..21928277 | 36..253 | 99 | -> | Plus |
| arm_3L | 21928367..21928604 | 254..491 | 100 | -> | Plus |
