FMO04751.5prime Sequence
1208 bp (987 high quality bases) assembled on 2008-08-08
> FMO04751.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGTCGACAAC
AATAACCTACGCAGTGCGGTGATCAGCGATGCCCCGCTACTGCCGCCCTC
GAGCAGCATCGGAGTGGGCGTTTCAAGCGGCGGAGGATATCCGCCGGAAG
CGGTGCTGCGTACTCCGTATGGCAATGTTAGGGCTCTGCCCGGACCGGCG
CAGCCCCCTCCTCTGCCGCAATCCCCATTCCAGCAGACACAACAGTACGG
TGGTTTCGGCAGCGGGTACGGCGGAAACAACTACGGACTCGGGGGTTATG
GTGGTTTCAACAGTGGCGCCTTTGGATATGGTGGACTGGGTGGATTTGGA
AGTGGACTTGGAAGTGGATTTGGAAGTGGATACGGGTATGGAGGTGGCTA
TGGCGGAGGCTATGGTGGAGGCTTCGGCGGTGGGTACAACAGATTTGGAG
CAATGGGTGAAAACGATGCGGAGCAGCGGTTCATTTATATGGCAGAGTCC
AGCTCGCCCCCGGCCTTTCAGAGCATCGAATCTCTGGTGTCGGCCATCGG
CAACATCGCCTCTATGCTGGACTCCACATTCTTCGCGCTGACCAGCTCGT
TTCGGGCCATTCTCGGCGTGGCCACGAACTTTGTACGGCTGCGAAGTGTG
TTTGCCCAGTTTTGGACCACGTTTGCCATATTCCGCGGTCTAAACTGGAT
GTACAGAAAGATTCTCTATTGGCTGCGCCTATCGAACCTGGACCCTTCAT
CGGCAGCCTTTAAGAGGGCCTTTGCCGAGGCACTGAACGAAAACAACGGG
CCAGGCGAGAGGAGCACCTATTGTGCCGCGAAGGGCAACTCACCCTGGCC
GGTGCTGGCCTTTATCAGCCTCTCTTTACTGCTCCCTACTTGATCATGAA
GCTGCTGGGAACCGTGACGAACACCGCCCAGGAGGAAACCCCGTAATCCC
GGCCAGTGGACTGCCCCGATTCGAACTCAGCCGTTTAACGATTCGTGGCT
CTCAGCCGAGCGAGCTTTCGCCTGCGCGCTGGCAAATGCTAATTGTGTCT
TCCCCCAGACATCCAAACAAACGTCATCTTGCTTGACACGGCTGGGCTCC
TAGCCTCCACCAACGGACTGACCCTCGGACTCTTTTCATTAGGTATTGGT
GTAATTCCCACAACGATGTGCGCCCATGGAAATGCACAGGAGATCAAACC
ATAGGCGT
FMO04751.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex13-RA | 1768 | CG4663-RA | 276..1362 | 38..1123 | 4690 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13229287..13229959 | 710..38 | 3350 | 99.9 | Minus |
| 2R | 25286936 | 2R | 13229004..13229232 | 937..710 | 955 | 97.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:19:25 has no hits.
FMO04751.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:43 Download gff for
FMO04751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex13-RA | 271..1261 | 33..1021 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:11:27 Download gff for
FMO04751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4663-RA | 265..1255 | 33..1021 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:15 Download gff for
FMO04751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex13-RA | 271..1261 | 33..1021 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:15 Download gff for
FMO04751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13229003..13229232 | 710..939 | 96 | <- | Minus |
| 2R | 13229288..13229979 | 22..709 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:43 Download gff for
FMO04751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9116508..9116737 | 710..939 | 96 | <- | Minus |
| arm_2R | 9116793..9117484 | 22..709 | 98 | <- | Minus |
