FMO04754.5prime Sequence
1204 bp (1046 high quality bases) assembled on 2008-08-08
> FMO04754.5prime
TTCGTATAGCATCCATTATACGAAGTTATCAGTCGACATGCCCGATGACA
CGCAGGATGCCAAGGCGCAGAAGTTGGCCGCGGCAAGGAAAAAGCTGAAG
GAGTACCAGCAGCGCGCCAGCAACAACAATGGGCAGCCGGGAGCAGAGGA
GCCGGTGGCTGCCACCACGCAATCGCACTCGTCCACTGTGAGCATATCCA
GCAATCTGTCGGAACGGTCAGACAGCGAGATAAATGTGAACGGTGGAGGA
GCAGGTGGGACGCAGCCGCCGGAGCAGTCTGCCCTGCCCACAGCCGCTTC
TTATTTTGCCCAAAACGAGTCGGAACACAATGGTGGACTGGCAGATGCCT
CTAGCTTGCAGGCCATCCAGGTGATCATCGCTGAAAAGGCCCAGCTCAAT
GCGGAGCTGACCAAGGTTCGCCTGGCTTGCCGGGAGCGTGAGCTAGAGCT
GGAGGAGCTTCGCATCCTCAAGGATCAGAATCAATTGCGTCTGGAGCAGC
TACAACAGCACTGCCAGGATCAACAGTCGACCGGTGAGCAGCAGCGACAG
CAGTACGCGCAACTCCAGGCACAACTGCTACAATCGCAGGCACAAATCAA
GGACCAACAGTCGCATCTCAACGAACTAGAGGCCCAGCTAAAGCAGAGCA
ACCAGCATCAAGAGGAACTGCAGCAACAGCTTTCCCAAAAATCGAACGAA
CTCGAGATGGCGCAGCTGAAGCTGCGGCAGCTCTCAGACGAGTCTAGCGT
CACCACAGACAACCGAGTGGAGTCGCTGGTGCAAACACAATACATGTACG
AGCAACAGATACGCGACCTCCAAGCGATGGTGGGTCAACTAACGCAGGAC
AAGGAGCAGGCAGCTGGTCAGTATCAAAACTATGTGCAGCATCAGAGTGG
CGAGATCGCCAAGCTCAACGAACGAACACAGAACTCTCAGAGTACTGAAC
TCACTGAGGAGCGAGACGCCAGCTTGTGAGCACGTGGCGCCCTGAGCGGA
TATACAAAAGAACATCAGCTGCAGCCCATTTAAGAGCAGTCAGTGCAGCA
TCCAGAGACAGCGGCAGAAGGCTAAGATGAACTGCCTGTCTTGAAGACGA
TCGAAACTCGAGTGAACGCCCGATCAGCTGAGAATCAGTCCAGACATCCC
TGCATTAAGACTCGCTAGACGAGTGGCAGACCACCTCGAGCCTGTGCAAG
CTGT
FMO04754.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GM130-RA | 2721 | CG11061-RA | 138..1225 | 35..1095 | 4795 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22126272..22127206 | 1019..93 | 4275 | 99.1 | Minus |
| 2R | 25286936 | 2R | 22127306..22127365 | 94..35 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:17:44 has no hits.
FMO04754.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:50 Download gff for
FMO04754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GM130-RA | 136..1130 | 31..1019 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:12:20 Download gff for
FMO04754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GM130-RA | 131..1125 | 31..1019 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:40 Download gff for
FMO04754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GM130-RA | 136..1130 | 31..1019 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:40 Download gff for
FMO04754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22126272..22127204 | 95..1019 | 99 | <- | Minus |
| 2R | 22127306..22127367 | 31..94 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:50 Download gff for
FMO04754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18013777..18014709 | 95..1019 | 99 | <- | Minus |
| arm_2R | 18014811..18014872 | 31..94 | 96 | | Minus |
