FMO04757.5prime Sequence
825 bp (825 high quality bases) assembled on 2008-08-08
> FMO04757.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGTGAACAACAC
TGTTGATACTGAAGCCACAGAGATTCGCTGCCAGGAGAAGTCCCGCGGGG
GATTGAGCTATGAGGTCATCCTGGCCGAACCGGCACCCAATGTGGCCGTT
CCAAAACGACCGGTCACCCCTGGCAAGAACGTTAGCGTCGAGGAGATTGA
GCAGAAACTTAAGGCGGCCGAGGAACGTCGCATTTCTCTAGAAGCCAAGA
AGATGGCTGACATCTCCACTAAGCTGGCTAAAGTCGAGGAGGCGACTCGC
AAAAAGGATGAGATCACCAATGAGTTTATTACTCAGACCAAGGAGCAGCT
GGAGTCGAAAATGGAGCTGCATGTGGAGAAGCGAGAGGCCATCATCAGTG
ACATGAAGGAGAAGCTAAAGATCCATGCCCAGGATATCGAAAAGACGCGT
GAGACTCTTGAGCAGCAGAAGGCCAACGAGCAGAAGGCAATCGAGGAAAA
GTTGAAGATTGCTCAGTCTCTTCGCGATGAGAATATCAAGAAAATGTTGG
ATCGCCTAAAGGAGCATAACACAATCAAAATTGCCGAAATCAAATCGCAG
AACGATCAATTGGAATGTCAAAAGATCGAGGAGAAAGCGCGCATTTATGA
GAACAAATTGTTCGCCGCCGAGCAGAAACGCGAAAAGGAATTGCAAAAAA
AAATTGAAAAAGTTCAAAAACTCGAACGTCGCGCTGAGCTCGTGCGCCAG
AACAAGGCCCAGGCCCAGGATTTGGATGGTCAGCAGAGCGCCATTGCCTC
CTCAGGCGCAAGCTTTCTAGACCAT
FMO04757.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| stai-RC | 1859 | CG31641-RC | 251..1021 | 37..807 | 3855 | 100 | Plus |
| stai-RD | 2872 | CG31641-RD | 537..1280 | 64..807 | 3720 | 100 | Plus |
| stai-RE | 2395 | CG31641-RE | 815..1557 | 65..807 | 3715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6122005..6122190 | 235..420 | 930 | 100 | Plus |
| 2L | 23513712 | 2L | 6121772..6121943 | 63..234 | 860 | 100 | Plus |
| 2L | 23513712 | 2L | 6122698..6122859 | 568..729 | 795 | 99.4 | Plus |
| 2L | 23513712 | 2L | 6122260..6122410 | 417..567 | 755 | 100 | Plus |
| 2L | 23513712 | 2L | 6122978..6123061 | 724..807 | 420 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 22:11:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tirant | 8526 | Tirant TIRANT 8526bp | 7724..7808 | 388..472 | 110 | 58.8 | Plus |
FMO04757.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:32 Download gff for
FMO04757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| stai-RC | 251..1025 | 37..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:23:44 Download gff for
FMO04757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| stai-RC | 250..1024 | 37..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:24 Download gff for
FMO04757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| stai-RC | 251..1025 | 37..812 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:24 Download gff for
FMO04757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6122698..6122853 | 568..723 | 100 | -> | Plus |
| 2L | 6122978..6123065 | 724..812 | 97 | | Plus |
| 2L | 6101771..6101798 | 37..64 | 100 | -> | Plus |
| 2L | 6121774..6121943 | 65..234 | 100 | -> | Plus |
| 2L | 6122005..6122190 | 235..420 | 100 | -> | Plus |
| 2L | 6122264..6122410 | 421..567 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:32 Download gff for
FMO04757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6101771..6101798 | 37..64 | 100 | -> | Plus |
| arm_2L | 6121774..6121943 | 65..234 | 100 | -> | Plus |
| arm_2L | 6122005..6122190 | 235..420 | 100 | -> | Plus |
| arm_2L | 6122264..6122410 | 421..567 | 100 | -> | Plus |
| arm_2L | 6122698..6122853 | 568..723 | 100 | -> | Plus |
| arm_2L | 6122978..6123065 | 724..812 | 97 | | Plus |
