FMO04761.5prime Sequence
376 bp (376 high quality bases) assembled on 2008-08-08
> FMO04761.5prime
AACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCTGTCGC
AATCCCTGCTGAGTGGCATGCGTGTCCTGCGCACAGAGGCCCGTCGTAAC
TTCGGAATCGTTGCCCCTGCCCTGAACAAGGCCTCCGATCCCATCCAGCA
GCTGTTCCTGGACAAAGTGCGCGAGTACAAGCAGAAGAGCGCCGGTGGCA
AGCTGGTGGACTCCAATCCCGATATTGAGCGGGAGCTGAAGACCGAACTG
GACCGTGTGGCCAAGCAGTTTGGCAGCGATGGCAAGACCGACATGCTGAA
GTTCCCCGAATTCCAGTTCCCCGATGTTAAGGTCGATCCCATCACCCAGG
CCCCACAGGCAAGCTTTCTAGACCAT
FMO04761.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ATPsyn-Cf6-RB | 616 | CG4412-RB | 150..467 | 41..358 | 1590 | 100 | Plus |
| ATPsyn-Cf6-RC | 586 | CG4412-RC | 85..402 | 41..358 | 1590 | 100 | Plus |
| ATPsyn-Cf6-RA | 526 | CG4412-RA | 85..402 | 41..358 | 1590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23355404..23355569 | 358..193 | 830 | 100 | Minus |
| 3R | 32079331 | 3R | 23355634..23355785 | 192..41 | 760 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:11:42 has no hits.
FMO04761.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:43 Download gff for
FMO04761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-Cf6-RA | 85..402 | 41..358 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:16:42 Download gff for
FMO04761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-Cf6-RA | 81..398 | 41..358 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:33 Download gff for
FMO04761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-Cf6-RA | 85..402 | 41..358 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:33 Download gff for
FMO04761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23355634..23355797 | 30..192 | 97 | | Minus |
| 3R | 23355404..23355569 | 193..358 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:43 Download gff for
FMO04761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19181356..19181519 | 30..192 | 97 | | Minus |
| arm_3R | 19181126..19181291 | 193..358 | 100 | <- | Minus |
