FMO04764.5prime Sequence
1150 bp (1074 high quality bases) assembled on 2008-08-08
> FMO04764.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGCCCACCA
ATAACTCAACCCTGGAGGTAATCTCGCCGAAAGTGCAGGTGGACGATGAG
TTCATCACCACCGACTACGATTACCAGACATCCCATGTGAAGCGCACCGC
CGATGGACAGCTCCAGGTGCACCCCCAGACGACGTCGCTGAAGATACGGA
CGGGTCGCCATGTGCCCAAGCTGGGCGTGATGCTGGTGGGATGGGGTGGC
AACAACGGATCCACGCTGACCGCCGCCCTGGAGGCCAATCGTCGCCAGCT
GAAGTGGCGCAAGCGGACGGGCGTCCAGGAGGCCAACTGGTATGGTTCCA
TTACACAGGCGTCCACCGTCTTCATTGGATCCGATGAGGACGGCGGTGAC
GTGTACGTGCCCATGAAGGAGCTGCTGCCCATGGTGGAGCCCGACAACAT
TATCGTGGATGGCTGGGATATCAGTGGCCTGCATTTGGGCGACGCCATGC
GCAGGGCCGAGGTCCTAGACGTGGCTCTGCAGGATCAGATCTACGATCAG
TTGGCTCAGTTGCGCCCACGTCCATCCATCTACGACCCCGACTTCATCGC
GGCCAATCAGTCGGATCGGGCTGACAACGTGATCCGTGGCACTCGTCTGG
AGCAGTACGAGCAAATCCGGAAGGACATCCGCGACTTCCGCGAGCGCAGT
GGCGTCGATTCGGTCATCGTCCTCTGGACTGCCAACACGGAGCGCTTCGC
GGATGTCCAGCCTGGTCTGAACACCACCAGCCAGGAGCTCATCGCCTCCC
TGGAGGCCAACCACTCGGAGGTGTCACCCTCCACGATCTTCGCAATGGCC
AGCATCGCCGAGGGGTGCACCTACATCAACGGCTCTCCGCAGACACCTTT
GTGCCCGGACTGATCCAGCTGGCCGAGGAGAAGAATGTTTCATTGCCGGC
GATGACTTCAGTCCGTCAGACCAGATCAGAGCGTGTTGTAGATTTCCTGT
GGGAGCTGGTATCAAGCCCGGTGTCATGCAGTTACACCATCTGGGCAACA
CGAATGCAAGAACTGTCGCTCCTCAACAGTCCGCCTCAAGGATTTCAGAG
CACGTGATGACGACACTGTGCCTCCACAGCTGTTGTAACGGACCCGATGA
FMO04764.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Inos-RA | 1986 | CG11143-RA | 138..1273 | 38..1150 | 4930 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7456149..7456850 | 865..164 | 3510 | 100 | Minus |
| 2R | 25286936 | 2R | 7458607..7458737 | 168..38 | 655 | 100 | Minus |
| 2R | 25286936 | 2R | 7455916..7456077 | 1018..865 | 410 | 95.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:12:29 has no hits.
FMO04764.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:48 Download gff for
FMO04764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inos-RA | 134..1194 | 30..1080 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:16:14 Download gff for
FMO04764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inos-RA | 123..1183 | 30..1080 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:01 Download gff for
FMO04764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inos-RA | 134..1194 | 30..1080 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:01 Download gff for
FMO04764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7455848..7456076 | 866..1080 | 92 | <- | Minus |
| 2R | 7456149..7456847 | 167..865 | 100 | <- | Minus |
| 2R | 7458609..7458745 | 28..166 | 96 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:48 Download gff for
FMO04764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3343353..3343581 | 866..1080 | 92 | <- | Minus |
| arm_2R | 3343654..3344352 | 167..865 | 100 | <- | Minus |
| arm_2R | 3346114..3346250 | 28..166 | 96 | -> | Minus |
