FMO04766.5prime Sequence
430 bp (430 high quality bases) assembled on 2008-08-08
> FMO04766.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCGAAAAGA
AGCGATTTGTGTGCGTTAATTGTGGACACAGAGTAAAAGAACTGTTCAAG
AAATACAGCAATACTATGAAAACCACGCAATGCGACAACTGTCACCAAAT
CACGGATAAATACATTGAGTTCGAGGAGTTTATCATATTAATAGATGCAC
TGCTATTAGATTCGTGCGCCTTCCGGCACATTATATACAATGGCGACTTT
AAGGTGACGAGCTCTACTGGAAGGTTTCGCTGGTGGTGCTGCTCCTGGAA
TCCTTTGCGCTGTGCCGCCAAAAACTGCCCGACCCTCCGAATGCCTCTTT
GCATGTCCACGAAAAGGGCTTTTACACATATACCCTTCAAAACATGGGAG
ATTACATGTTCAGCAAGCTTTCTAGACCAT
FMO04766.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32442-RB | 942 | CG32442-RB | 93..467 | 38..412 | 1875 | 100 | Plus |
| CG32442-RA | 934 | CG32442-RA | 93..459 | 38..412 | 1745 | 97.9 | Plus |
| CG32442-RC | 930 | CG32442-RC | 93..455 | 38..412 | 1685 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21528770..21528910 | 400..260 | 705 | 100 | Minus |
| 3L | 28110227 | 3L | 21528958..21529085 | 261..134 | 640 | 100 | Minus |
| 3L | 28110227 | 3L | 21529145..21529241 | 134..38 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:57:32 has no hits.
FMO04766.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:37 Download gff for
FMO04766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-RB | 93..472 | 38..419 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:14:58 Download gff for
FMO04766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-RB | 66..445 | 38..419 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:45:29 Download gff for
FMO04766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-RB | 93..472 | 38..419 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:45:29 Download gff for
FMO04766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21528770..21528908 | 262..400 | 100 | <- | Minus |
| 3L | 21528958..21529085 | 134..261 | 100 | <- | Minus |
| 3L | 21529146..21529241 | 38..133 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:37 Download gff for
FMO04766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21521870..21522008 | 262..400 | 100 | <- | Minus |
| arm_3L | 21522058..21522185 | 134..261 | 100 | <- | Minus |
| arm_3L | 21522246..21522341 | 38..133 | 100 | | Minus |
