FMO04770.5prime Sequence
442 bp (442 high quality bases) assembled on 2008-08-08
> FMO04770.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAATTCTTCAA
CTGCTCTTATGTGCTTTGCACTGCTGCTGATTAGTCCTCTATGCATGGGC
TATTCCGACGAAGATCGTGAGGCTGACAACCTTAGAATTGCTGAAATTAT
CAAAAACGCCCAGGACGATGACTCCAAAATCAATAGCACCCAGGAACTAC
TTGACATCTATAGGCGTTTATATCCCAGTTTGACCCCTGAGGAACGGGAG
AGTATCGATAAGTTCGTCAACGAGCATACGGATGCCATTATAATCGATGG
AGTTCCGATTCAGGGAGGTCGAAAGGCGAGGATCGTTGGAAAGATTGTAT
CTCCAGGTGTGAAGGGCCTTGCAACTGGATTCTTTGAAGAATTGGGTTCA
AAGCTTGCTCAATTATTCACTGGTGCAAGCTTTCTAGACCAT
FMO04770.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TotA-RA | 579 | CG31509-RA | 42..428 | 38..424 | 1935 | 100 | Plus |
| TotC-RA | 530 | CG31508-RA | 69..398 | 62..391 | 390 | 75.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20871186..20871549 | 61..424 | 1820 | 100 | Plus |
| 3R | 32079331 | 3R | 20873119..20873448 | 62..391 | 390 | 74.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:23:31 has no hits.
FMO04770.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:52 Download gff for
FMO04770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotA-RA | 42..435 | 38..432 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:15:31 Download gff for
FMO04770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotA-RA | 42..435 | 38..432 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:06 Download gff for
FMO04770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotA-RA | 42..435 | 38..432 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:06 Download gff for
FMO04770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20871077..20871099 | 38..60 | 100 | -> | Plus |
| 3R | 20871186..20871556 | 61..432 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:52 Download gff for
FMO04770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16696799..16696821 | 38..60 | 100 | -> | Plus |
| arm_3R | 16696908..16697278 | 61..432 | 98 | | Plus |
