FMO04771.5prime Sequence
416 bp (416 high quality bases) assembled on 2008-08-08
> FMO04771.5prime
CTTCGTATAGCATACATTTAACGAAGTTATCAGTCGACATGCATTTCACC
GCTAGTCTTCTATTCATTGGACTGGCTTGTGCCTTCTCGAGTGCCTGGGC
TTATCCCTATCCTGATCCCCGAGAGATTGTGAATCTGCAGCCTGAACCAC
TGGCATATGCTCCCAATTTTGATGTGCCCCTGCACAGAGTGCGTCGCCAG
TTCCAATTGAATGGCGGTGGCGGTGGAAGCCCAAAGCAAGGATTCGATCT
GAGCCTCAACGGACGTGCTCCCGTTTGGCAGAGCCCCAATGGACGCCACT
CCTTCGATGCCACGGGATCGTATGCCCAGCACCTTGGTGGACCCTATGGC
AACAGCCGGCCTCAGTGGGGAGCCGGTGGAGTGTATACCTTCAGGTTTGC
AAGCTTTCTAGACCAT
FMO04771.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DptB-RA | 449 | CG10794-RA | 32..391 | 39..398 | 1800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18867595..18867837 | 156..398 | 1215 | 100 | Plus |
| 2R | 25286936 | 2R | 18867422..18867538 | 39..155 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:11:41 has no hits.
FMO04771.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:33 Download gff for
FMO04771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DptB-RA | 21..391 | 29..398 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:14:57 Download gff for
FMO04771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DptB-RA | 22..392 | 29..398 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:36 Download gff for
FMO04771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DptB-RA | 21..391 | 29..398 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:36 Download gff for
FMO04771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18867422..18867538 | 39..155 | 100 | -> | Plus |
| 2R | 18867595..18867837 | 156..398 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:33 Download gff for
FMO04771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14754927..14755043 | 39..155 | 100 | -> | Plus |
| arm_2R | 14755100..14755342 | 156..398 | 100 | | Plus |
