FMO04774.5prime Sequence
514 bp (514 high quality bases) assembled on 2008-08-08
> FMO04774.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAACAGCGATG
AGGTGCAACTGATCAAGAAGACCTGGGAAATCCCCGTGGCAACACCAACA
GATTCTGGAGCGGCGATACTGACGCAGTTTTTCAACCGCTTTCCGTCCAA
CTTGGAGAAGTTCCCCTTCCGCGATGTTCCTTTGGAGGAGCTAAGTGGAA
ATGCTCGCTTCCGAGCACATGCCGGCAGAATCATAAGGGTCTTTGACGAG
TCCATCCAGGTCCTGGGCCAGGATGGCGATCTGGAGAAGCTGGACGAGAT
CTGGACCAAAATTGCCGTTAGTCACATTCCGCGGACCGTTTCCAAGGAGT
CTTACAACCAACTGAAAGGAGTTATCCTGGATGTGCTGACAGCTGCCTGC
AGTCTGGACGAGAGTCAAGCGGCCACGTGGGCCAAGCTGGTGGACCATGT
CTACGGAATCATCTTCAAGGCGATCGACGACGACGGCAACGCCAAGGCAA
GCTTTCTAGACCAT
FMO04774.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob1-RF | 921 | CG9734-RF | 101..561 | 36..496 | 2305 | 100 | Plus |
| glob1-RD | 1143 | CG9734-RD | 323..783 | 36..496 | 2305 | 100 | Plus |
| glob1-RA | 1274 | CG9734-RA | 454..914 | 36..496 | 2305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15897548..15897709 | 358..197 | 810 | 100 | Minus |
| 3R | 32079331 | 3R | 15897774..15897935 | 197..36 | 810 | 100 | Minus |
| 3R | 32079331 | 3R | 15897286..15897423 | 496..359 | 690 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:57:29 has no hits.
FMO04774.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:34 Download gff for
FMO04774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob1-RB | 230..695 | 30..496 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:14:11 Download gff for
FMO04774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob1-RD | 320..785 | 30..496 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:45:26 Download gff for
FMO04774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob1-RA | 449..914 | 30..496 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:45:26 Download gff for
FMO04774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15897286..15897423 | 359..496 | 100 | <- | Minus |
| 3R | 15897548..15897709 | 197..358 | 100 | <- | Minus |
| 3R | 15897775..15897940 | 30..196 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:34 Download gff for
FMO04774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11723008..11723145 | 359..496 | 100 | <- | Minus |
| arm_3R | 11723270..11723431 | 197..358 | 100 | <- | Minus |
| arm_3R | 11723497..11723662 | 30..196 | 98 | | Minus |
