FMO04775.5prime Sequence
409 bp (409 high quality bases) assembled on 2008-08-08
> FMO04775.5prime
AACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTGCAGTC
TGCCCCATCATTCATCTTTCGGCGTCGGTCTGGTGACGCGCAAGATGGGC
AACAGCCTGAGCCCCACAGTGGAGGTGACCTTGGAGGGCGATACCTACAC
CCTGACTACCACCTCCACCTTCAAGACCTCTGCCATCAGCTTCAAGCTGG
GCGTTGAGTTCGACGAGGAGACCCTGGACGGTCGCAACGTCAAGAGCATC
ATCACCCTGGATGGCAACAAGCTGACGCAGGAGCAGAAGGGCGACAAGCC
CACCACCATCGTCCGCGAGTTCACCGACAACGAGCTGATCACCACCCTCA
CCATCGGCAACGTTAAGTGCGTGCGCGTCTACAAGGCCGTCGCAAGCTTT
CTAGACCAT
FMO04775.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fabp-RA | 1051 | CG6783-RA | 435..785 | 41..391 | 1755 | 100 | Plus |
| fabp-RB | 723 | CG6783-RB | 137..457 | 71..391 | 1605 | 100 | Plus |
| fabp-RC | 1660 | CG6783-RC | 137..409 | 71..343 | 1365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11564440..11564712 | 343..71 | 1365 | 100 | Minus |
| 3R | 32079331 | 3R | 11564324..11564371 | 391..344 | 240 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:57:36 has no hits.
FMO04775.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:39 Download gff for
FMO04775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fabp-RA | 424..784 | 36..396 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:15:00 Download gff for
FMO04775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6783-RA | 424..784 | 36..396 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:45:31 Download gff for
FMO04775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fabp-RA | 429..789 | 36..396 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:45:31 Download gff for
FMO04775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11564320..11564371 | 344..396 | 96 | <- | Minus |
| 3R | 11564440..11564711 | 72..343 | 100 | <- | Minus |
| 3R | 11564784..11564820 | 36..71 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:39 Download gff for
FMO04775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7390042..7390093 | 344..396 | 96 | <- | Minus |
| arm_3R | 7390162..7390433 | 72..343 | 100 | <- | Minus |
| arm_3R | 7390506..7390542 | 36..71 | 91 | | Minus |
