FMO04777.5prime Sequence
445 bp (445 high quality bases) assembled on 2008-08-08
> FMO04777.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCTTTCGTTG
GCAAGAAGTACAAGCTGGACAAGTCCGAGAACTTCGATGAGTACATGAAG
GAGCTGGGCGTCGGTCTGGTGACGCGCAAGATGGGCAACAGCCTGAGCCC
CACAGTGGAGGTGACCTTGGAGGGCGATACCTACACCCTGACTACCACCT
CCACCTTCAAGACCTCTGCCATCAGCTTCAAGCTGGGCGTTGAGTTCGAC
GAGGAGACCCTGGACGGTCGCAACGTCAAGAGCATCATCACCCTGGATGG
CAACAAGCTGACGCAGGAGCAGAAGGGCGACAAGCCCACCACCATCGTCC
GCGAGTTCACCGACAACGAGCTGATCACCACCCTCACCATCGGCAACGTT
AAGTGCGTGCGCGTCTACAAGGCCGTCGCAAGCTTTCTAGACCAT
FMO04777.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fabp-RB | 723 | CG6783-RB | 68..457 | 38..427 | 1950 | 100 | Plus |
| fabp-RC | 1660 | CG6783-RC | 68..409 | 38..379 | 1710 | 100 | Plus |
| sea-RD | 1660 | CG6782-RD | 68..409 | 38..379 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11564440..11564712 | 379..107 | 1365 | 100 | Minus |
| 3R | 32079331 | 3R | 11566917..11566987 | 108..38 | 355 | 100 | Minus |
| 3R | 32079331 | 3R | 11564324..11564371 | 427..380 | 240 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:29:43 has no hits.
FMO04777.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:51:02 Download gff for
FMO04777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fabp-RB | 63..456 | 38..432 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:15:01 Download gff for
FMO04777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6783-RB | 63..456 | 38..432 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:29 Download gff for
FMO04777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fabp-RB | 68..461 | 38..432 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:29 Download gff for
FMO04777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11564320..11564371 | 380..432 | 96 | <- | Minus |
| 3R | 11564440..11564711 | 108..379 | 100 | <- | Minus |
| 3R | 11566918..11566987 | 38..107 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:51:02 Download gff for
FMO04777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7390042..7390093 | 380..432 | 96 | <- | Minus |
| arm_3R | 7390162..7390433 | 108..379 | 100 | <- | Minus |
| arm_3R | 7392640..7392709 | 38..107 | 100 | | Minus |
