FMO04782.5prime Sequence
467 bp (467 high quality bases) assembled on 2008-08-08
> FMO04782.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGTGGCGAA
CGCCGCAGAACCACCACACACAGTATTGAGGTGCCATCGCAGCTGACGGC
GCAGCACAATTCCCGGAAACGTCCGCCCAGCGATCACCAGGACTACGGCA
ACTATCTGGAAACATGCCGTGCCGCCGAGATTCTGTCATCGATGAAGTTG
CAGAGTCCGCATGGCTCAATGGCCGACAAGTGCTCGAGTCCCGGCAGCAG
CTCTTCGGCTTCCTGGAGCTCCGGTTCCCCGTCGCCGCCATTGAGTGACG
ACGGCCACGCCCACCACAGCCCACACAATATCATGTCGCCCCACGATGCG
GACAACGCACGCACACGCACAGCATCCGTGTCCACGTCGGACGAGGGCAT
TGTCATCGACTACAAGGAGGAGCGCAAGAAAAAGGTGGGTGATTCGATCG
CAAGCTTTCTAGACCAT
FMO04782.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut4EF-RE | 2589 | CG34360-RE | 918..1332 | 35..449 | 2075 | 100 | Plus |
| Glut4EF-RD | 4787 | CG34360-RD | 1651..2060 | 35..444 | 2020 | 99.5 | Plus |
| Glut4EF-RH | 10796 | CG34360-RH | 1651..2050 | 35..434 | 2000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9943677..9943909 | 217..449 | 1165 | 100 | Plus |
| 3R | 32079331 | 3R | 9943481..9943587 | 110..216 | 535 | 100 | Plus |
| 3R | 32079331 | 3R | 9930471..9930545 | 35..109 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:11:38 has no hits.
FMO04782.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:41 Download gff for
FMO04782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut4EF-RE | 914..1336 | 30..454 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:29:37 Download gff for
FMO04782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34360-RE | 914..1336 | 30..454 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:31 Download gff for
FMO04782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut4EF-RE | 914..1336 | 30..454 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:31 Download gff for
FMO04782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9930467..9930545 | 30..109 | 97 | -> | Plus |
| 3R | 9943481..9943587 | 110..216 | 100 | -> | Plus |
| 3R | 9943677..9943913 | 217..454 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:41 Download gff for
FMO04782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5756189..5756267 | 30..109 | 97 | -> | Plus |
| arm_3R | 5769203..5769309 | 110..216 | 100 | -> | Plus |
| arm_3R | 5769399..5769635 | 217..454 | 99 | | Plus |
