FMO04785.5prime Sequence
822 bp (822 high quality bases) assembled on 2008-08-08
> FMO04785.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGACTGGCTATT
CGGCAAGAAGATCAGCCCCGATGAGATGCTGCGTAAGAATCAGCGGGCGC
TCAACAAAGCGATGCGAGATCTGGACCGCGAGCGGATGAAAATGGAGCAG
CAGGAGAAGAAGATTATCGCGGATATCAAGAAGATGGCCAAGGAGGGTCA
AATGGATGCCGTGAAGATCATGGCCAAGGATCTGGTGCGCACGCGGCGGT
ATGCCAAGAAGTTCATGCTGATGAAGGCAAACATCCAGGCGGTGTCCCTC
AAAATTCAGACGCTCAAGTCGCAGAACACAATGGCACAGGCCATGAAAGG
TGTCACGAAGGCCATGCAGAACATGAACCGCCAGCTGAATCTCCCGCAAA
TCCAGAAGATCCTGCAGGACTTCGAGAAACAGTCGGAAATGATGGACATG
AAGGAGGAGATGATCAACGATGCCATCGATGACGCCATGGAGGACGAGGG
CGACGAGGAGGAGACGGATGCTGTTGTGTCCCAGGTGCTGGACGAACTGG
GTCTGCAATTGGGCGAACAGCTGGGAGACCTTCCTTCCGCCTCCGGTTCC
CTTTCCATAGCCGGCGGCGCTGGCGCTCAGAAAGCACAGGCTGTGGCCGC
TGGTGGCGTTGGCGGCGGTGGAGCCGCCGGCGGAGGTGGAGCTAGTGGTG
GCGGCGCTGGTGGTCCGGGAGCTCCCGGTGGCAGTGGTGCCTCATCGCCC
ATGTCCGATGCCGATGCGGATCTTCACGCGCGCCTGGATAAGCTGCGCAA
GGATGCAAGCTTTCTAGACCAT
FMO04785.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps2-RA | 1248 | CG14542-RA | 95..864 | 35..804 | 3835 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26053288..26053744 | 348..804 | 2270 | 99.8 | Plus |
| 3R | 32079331 | 3R | 26052915..26053231 | 35..351 | 1585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:28:01 has no hits.
FMO04785.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:20 Download gff for
FMO04785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| vps2-RA | 86..869 | 26..810 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:13:00 Download gff for
FMO04785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14542-RA | 82..865 | 26..810 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:27 Download gff for
FMO04785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps2-RA | 86..869 | 26..810 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:27 Download gff for
FMO04785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26052906..26053229 | 26..349 | 98 | -> | Plus |
| 3R | 26053290..26053742 | 350..802 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:20 Download gff for
FMO04785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21878628..21878951 | 26..349 | 98 | -> | Plus |
| arm_3R | 21879012..21879464 | 350..802 | 99 | -> | Plus |
