FMO04790.5prime Sequence
336 bp (336 high quality bases) assembled on 2008-08-08
> FMO04790.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGACTGGATCAGT
GCACGATCCGAAATGGAGCCTGGAGCGCCGCGAGTCCTCTGGCCATTTGG
TGTGGCGCAAGGACTCTCCGGAGTCGAAAGTCCGTTTTCGCTTCGACGTC
GAGGTCCTGGAGTTCGAGAGGCATCCTCATGAGGAGCTGGATGACAAAGA
GGATCACTTCTCGATGACCAATCTCTCGGCGACAGTGGCCATGTGCGCAA
CTTGTGTTGCCGTGGTGGCCGTCTCCGTGTTCCTGCCCTGGTATTTGATG
GAGAAAGTGGGATCGCTTGCAAGCTTTCTAGACCAT
FMO04790.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18622-RB | 752 | CG18622-RB | 154..435 | 37..318 | 1410 | 100 | Plus |
| CG18622-RC | 949 | CG18622-RC | 351..632 | 37..318 | 1410 | 100 | Plus |
| CG18622-RA | 837 | CG18622-RA | 239..520 | 37..318 | 1410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16983827..16984097 | 318..48 | 1355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:31:37 has no hits.
FMO04790.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:52 Download gff for
FMO04790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18622-RA | 237..523 | 34..322 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:09:46 Download gff for
FMO04790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18622-RA | 443..729 | 34..322 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:15 Download gff for
FMO04790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18622-RA | 237..523 | 34..322 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:15 Download gff for
FMO04790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16983823..16984100 | 41..322 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:52 Download gff for
FMO04790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12809545..12809822 | 41..322 | 97 | | Minus |
