FMO04791.5prime Sequence
747 bp (747 high quality bases) assembled on 2008-08-08
> FMO04791.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGATCCAGTAGT
ACTTGTTTTATCTTATGGAGCAGTTCCTGCACTGGAAATAGTCGAAAATA
TTTTATCTGAAGTGAATCAATCGAAGGAATCAACATCAACGGAGTGCTCA
CTTAATTGTTATAAGTGCATCATTAAAACCAAGTACTATAACACTTCTAT
CAACTTAATTCCATTTTCTGGAAAACTGGAAGCTGTGCCGGAGAAAATTC
TTCAAGCAACCGAGGCGTTGATTATTTACTTTGATTCACAAGACACCTCC
TTTATCGACACTATTCCCAAGACGTTAGCGAAGAATGAACAGATTCAGCT
GGGCTTTCTGCTAACCTCTTCCACTTCAGAAGAAGGTGGATTGTCCTTTG
GAGAAATTAAGGAGAAAACGAATTTCCTTTTTGACATCATAACATTGAGA
AGCAATGTTGAGAGTGACCCAGATGAAGCTGAAAAGGACTACGAGGAAGT
TGTGGAGGGTTTGAAAAACGTAGTTTGGTCCAATGTCAAGTTTGGTTCTG
ATCACAAGGAGGAAATCAGTGCCGACGAGCTGGATAGTCAGCTGAAGGAC
TTTGAAAACTTACTCCTCACGGCGCAAAATCTACGTAACGATACGAGTCT
CACTCGGGAACAATTTCTGGATCGGGCTGAGCAGTTTGCAGGCATAGTTT
CCTCGATTTTAAATGACAATGATAGCGACGCAAGCTTTCTAGACCAT
FMO04791.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32109-RA | 1052 | CG32109-RA | 65..757 | 37..729 | 3465 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12745981..12746236 | 295..550 | 1280 | 100 | Plus |
| 3L | 28110227 | 3L | 12745729..12745925 | 98..294 | 985 | 100 | Plus |
| 3L | 28110227 | 3L | 12746296..12746475 | 550..729 | 900 | 100 | Plus |
| 3L | 28110227 | 3L | 12745408..12745468 | 37..97 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:25:14 has no hits.
FMO04791.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:22 Download gff for
FMO04791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32109-RA | 58..762 | 29..736 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:29:38 Download gff for
FMO04791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32109-RA | 52..754 | 29..733 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:00 Download gff for
FMO04791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32109-RA | 58..762 | 29..736 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:00 Download gff for
FMO04791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12745401..12745468 | 29..97 | 94 | -> | Plus |
| 3L | 12745729..12745925 | 98..294 | 100 | -> | Plus |
| 3L | 12745981..12746236 | 295..550 | 100 | -> | Plus |
| 3L | 12746297..12746481 | 551..734 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:22 Download gff for
FMO04791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12738501..12738568 | 29..97 | 94 | -> | Plus |
| arm_3L | 12738829..12739025 | 98..294 | 100 | -> | Plus |
| arm_3L | 12739081..12739336 | 295..550 | 100 | -> | Plus |
| arm_3L | 12739397..12739581 | 551..734 | 97 | -> | Plus |
