FMO04795.5prime Sequence
797 bp (797 high quality bases) assembled on 2008-08-08
> FMO04795.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGTAGTGTTGGAG
ACGGAGAAGACCAGCGCCCCCAGCACCGAGCAGGGTCGTCCGGAACCACC
AACTTCGGCTGCAGCGCCCGCCGAGGCTAAGGATGTCAAGCCCAAGGAGG
ACCCACAGGAGACTGGTGAACCAGCAGGCAACACTGCAACCACTACTGCT
CCTGCCGGCGACGATGCTGTGCGCACCGAGCATTTATACAAACACCCGCT
CATGAATGTCTGGACGCTGTGGTACCTTGAAAACGATCGGTCCAAGTCCT
GGGAGGACATGCAAAACGAGATCACCAGCTTCGATACCGTCGAGGACTTC
TGGAGCCTATACAACCACATCAAGCCCCCATCAGAGATCAAGCTGGGTAG
TGACTACTCGCTATTCAAGAAGAACATTCGTCCCATGTGGGAGGATGCAG
CCAACAAACAGGGCGGTCGTTGGGTCATTACCCTTAACAAAAGCTCCAAG
ACCGATCTGGATAACCTATGGCTCGATGTGCTGCTCTGCCTGATTGGTGA
GGCCTTCGATCACTCTGATCAGATCTGCGGCGCTGTTATAAACATTCGCG
GCAAGAGCAACAAGATATCCATCTGGACTGCCGACGGAAACAACGAGGAA
GCTGCCCTTGAGATTGGTCACAAGCTGCGCGATGCCCTGCGTCTGGGACG
CAACAACTCGCTGCAGTATCAGTTGCACAAGGACACGATGGTCAAGCAGG
GCTCCAACGTGAAATCGATCTACACTTTGGCAAGCTTTCTAGACCAT
FMO04795.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-4E-RC | 1156 | CG4035-RC | 157..901 | 35..779 | 3725 | 100 | Plus |
| eIF-4E-RI | 1793 | CG4035-RI | 819..1538 | 60..779 | 3600 | 100 | Plus |
| eIF-4E-RH | 1492 | CG4035-RH | 518..1237 | 60..779 | 3600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9400583..9400955 | 430..58 | 1865 | 100 | Minus |
| 3L | 28110227 | 3L | 9399873..9400033 | 779..619 | 805 | 100 | Minus |
| 3L | 28110227 | 3L | 9400419..9400519 | 530..430 | 505 | 100 | Minus |
| 3L | 28110227 | 3L | 9400097..9400185 | 618..530 | 445 | 100 | Minus |
| X | 23542271 | X | 1158961..1159338 | 637..260 | 390 | 73.5 | Minus |
| 3R | 32079331 | 3R | 29026520..29026848 | 628..300 | 325 | 73.3 | Minus |
| 3L | 28110227 | 3L | 6665168..6665336 | 429..261 | 290 | 78.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:12:49 has no hits.
FMO04795.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:54 Download gff for
FMO04795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-4E-RC | 148..906 | 28..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:16:45 Download gff for
FMO04795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-4E-RC | 153..911 | 28..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:10 Download gff for
FMO04795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-4E-RC | 148..906 | 28..785 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:10 Download gff for
FMO04795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9400583..9400953 | 60..430 | 100 | <- | Minus |
| 3L | 9399868..9400033 | 619..785 | 98 | <- | Minus |
| 3L | 9400097..9400184 | 531..618 | 100 | <- | Minus |
| 3L | 9400419..9400518 | 431..530 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:54 Download gff for
FMO04795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9392968..9393133 | 619..785 | 98 | <- | Minus |
| arm_3L | 9393197..9393284 | 531..618 | 100 | <- | Minus |
| arm_3L | 9393519..9393618 | 431..530 | 100 | <- | Minus |
| arm_3L | 9393683..9394053 | 60..430 | 100 | <- | Minus |
