FMO04796.5prime Sequence
535 bp (535 high quality bases) assembled on 2008-08-08
> FMO04796.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGTTTTATAT
GTTTAAAGACTTCACTATTCACTATTCACTACTCACTTATTTTTCTTAAC
CTATTTTCAGATCGTAATGTATTCAACGCACAGGAGGATCCTTCATCGAA
CCGCTATGGCGACATTTTCTTCATCGAACCCGGCAGCGTGGAGGCCAACC
GCATTCGCGATCAACTGGAAAAGGATGAAAAGGATTTACCCAGCTACGAC
GAGGTGATGCGCATGTGTAACCTGACCACTCCCACAGCAGCAGCGGCTGG
AATGCCTGTTCCCCAATCGCCCCTCGGTGTACCCAGTCCCATTGGAATCG
CGGCACTGCCGGCGCCACCGTATTCGGAGACAGATCCACATTCCTCGTCC
GCCGCAGAAGCCACTGTCATCGCAATGGAACCGATGGAGCCATCCACCTC
CCGCGCGGCACAGATTCCACCCAGCTCCGGATCTGGTCCTCCTGCTCCAT
TGCCAACGACAGCGGTGGCAAGCTTTCTAGACCAT
FMO04796.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12963-RK | 874 | CG12963-RK | 250..659 | 108..517 | 2050 | 100 | Plus |
| CG12963-RG | 971 | CG12963-RG | 347..756 | 108..517 | 2050 | 100 | Plus |
| CG12963-RN | 821 | CG12963-RN | 197..606 | 108..517 | 2050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15561742..15562221 | 38..517 | 2400 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:06:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 3427..3468 | 224..183 | 111 | 73.8 | Minus |
FMO04796.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:32 Download gff for
FMO04796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12963-RN | 189..606 | 100..517 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:12:21 Download gff for
FMO04796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12963-RB | 471..964 | 26..517 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:16 Download gff for
FMO04796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12963-RN | 189..606 | 100..517 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:16 Download gff for
FMO04796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15561728..15562221 | 26..517 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:32 Download gff for
FMO04796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11449233..11449726 | 26..517 | 99 | | Plus |
