FMO04803.5prime Sequence
824 bp (824 high quality bases) assembled on 2008-08-08
> FMO04803.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGTTTACT
TTGACCAACAAGAACGTGATTTTCGTTGCCGGTCTGGGAGGCATTGGTCT
GGACACCAGCAAGGAGCTGCTCAAGCGCGATCTGAAGAACCTGGTGATCC
TCGACCGCATTGAGAACCCGGCTGCCATTGCCGAGCTGAAGGCAATCAAT
CCAAAGGTGACCGTCACCTTCTACCCCTATGATGTGACCGTGCCCATTGC
CGAGACCACCAAGCTGCTGAAGACCATCTTCGCCCAGCTGAAGACCGTCG
ATGTCCTGATCAACGGAGCTGGTATCCTGGACGATCACCAGATCGAGCGC
ACCATTGCCGTCAACTACACTGGCCTGGTCAACACCACGACGGCCATTCT
GGACTTCTGGGACAAGCGCAAGGGCGGTCCCGGTGGTATCATCTGCAACA
TTGGATCCGTCACTGGATTCAATGCCATCTACCAGGTGCCCGTCTACTCC
GGCACCAAGGCCGCCGTGGTCAACTTCACCAGCTCCCTGGCGAAACTGGC
CCCCATTACCGGCGTGACGGCTTACACTGTGAACCCCGGCATCACCCGCA
CCACCCTGGTGCACACGTTCAACTCCTGGTTGGATGTTGAGCCTCAGGTT
GCCGAGAAGCTCCTGGCTCATCCCACCCAGCCCTCGTTGGCCTGCGCCGA
GAACTTCGTCAAGGCTATCGAGCTGAACCAGAACGGAGCCATCTGGAAAC
TGGACTTGGGCACCCTGGAGGCCATCCAGTGGACCAAGCACTGGGACTCC
GGCATCGCAAGCTTTCTAGACCAT
FMO04803.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adhr-RB | 2024 | CG3484-RB | 72..840 | 38..806 | 3845 | 100 | Plus |
| Adhr-RA | 2080 | CG3484-RA | 128..896 | 38..806 | 3845 | 100 | Plus |
| Adh-RE | 1001 | CG3481-RE | 72..840 | 38..806 | 3845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14616501..14616907 | 136..542 | 2035 | 100 | Plus |
| 2L | 23513712 | 2L | 14616977..14617241 | 542..806 | 1325 | 100 | Plus |
| 2L | 23513712 | 2L | 14616338..14616437 | 38..137 | 500 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:23:10 has no hits.
FMO04803.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:46 Download gff for
FMO04803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adh-RH | 66..844 | 32..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:14:35 Download gff for
FMO04803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adh-RH | 64..842 | 32..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:58 Download gff for
FMO04803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adh-RE | 66..844 | 32..811 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:58 Download gff for
FMO04803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14616332..14616437 | 32..137 | 98 | -> | Plus |
| 2L | 14616503..14616907 | 138..542 | 100 | -> | Plus |
| 2L | 14616978..14617245 | 543..811 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:46 Download gff for
FMO04803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14616332..14616437 | 32..137 | 98 | -> | Plus |
| arm_2L | 14616503..14616907 | 138..542 | 100 | -> | Plus |
| arm_2L | 14616978..14617245 | 543..811 | 99 | | Plus |
