FMO04808.5prime Sequence
749 bp (749 high quality bases) assembled on 2008-08-08
> FMO04808.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAATAACTTT
TTGGAATACATTTCGGTATTACATTGTTCCTCCATGTCGAAATCCAATCT
CGTTATCTCGTGCCTTCTGCTGGTGGCCATCAGCAACAGCCTGGTCCGGG
CTCAGGATCTGAAAGTGGAGGTGATCAGCACGCCGGAGGTGTGCGAACAA
AAGTCCAAGAACGGCGATTCCCTCACCATGCACTACACTGGAACTCTGCA
GGCCGATGGCAAGAAATTCGACTCGAGCTTCGACCGCGACCAGCCCTTCA
CATTCCAATTGGGCGCCGGCCAGGTGATTAAGGGTTGGGATCAGGGTCTG
CTCAACATGTGCGTGGGTGAGAAGCGCAAGCTGACCATTCCTCCCCAGCT
GGGCTATGGTGACCAGGGTGCCGGCAACGTGATACCGCCCAAGGCCACCC
TCCTCTTCGATGTGGAGCTGATCAACATCGGCAATGCCCCGCCCACCACC
AATGTGTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGA
AGAGGTCAGCGAGTATCTAAAGAAGCAGATGACCGCCGTGGAGGGACAGG
ATTCCGAGGAGCTGAAGAACATGCTGGCTGAGAACGACAAGCTGGTGGAG
GAGATCTTTCAGCACGAGGATAAGGATAAGAACGGTTTCATCTCGCACGA
TGAGTTCTCGGGACCCAAACACGACGAGCTGGCAAGCTTTCTAGACCAT
FMO04808.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fkbp14-RC | 1301 | CG9847-RC | 107..799 | 39..731 | 3465 | 100 | Plus |
| Fkbp14-RF | 1350 | CG9847-RF | 199..848 | 82..731 | 3250 | 100 | Plus |
| Fkbp14-RE | 1294 | CG9847-RE | 143..792 | 82..731 | 3250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21495131..21495326 | 277..82 | 980 | 100 | Minus |
| 2R | 25286936 | 2R | 21488017..21488207 | 556..366 | 955 | 100 | Minus |
| 2R | 25286936 | 2R | 21487669..21487847 | 731..553 | 895 | 100 | Minus |
| 2R | 25286936 | 2R | 21488271..21488363 | 368..276 | 465 | 100 | Minus |
| 2R | 25286936 | 2R | 21497781..21497823 | 81..39 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:57:00 has no hits.
FMO04808.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:16 Download gff for
FMO04808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp14-RC | 107..799 | 39..731 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:24:01 Download gff for
FMO04808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp13-RB | 104..796 | 39..731 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:45:11 Download gff for
FMO04808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp14-RC | 107..799 | 39..731 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:45:11 Download gff for
FMO04808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21487669..21487845 | 555..731 | 100 | <- | Minus |
| 2R | 21488019..21488206 | 367..554 | 100 | <- | Minus |
| 2R | 21488273..21488361 | 278..366 | 100 | <- | Minus |
| 2R | 21495131..21495326 | 82..277 | 100 | <- | Minus |
| 2R | 21497781..21497820 | 42..81 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:16 Download gff for
FMO04808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17375174..17375350 | 555..731 | 100 | <- | Minus |
| arm_2R | 17375524..17375711 | 367..554 | 100 | <- | Minus |
| arm_2R | 17375778..17375866 | 278..366 | 100 | <- | Minus |
| arm_2R | 17382636..17382831 | 82..277 | 100 | <- | Minus |
| arm_2R | 17385286..17385325 | 42..81 | 100 | <- | Minus |
