FMO04811.5prime Sequence
1160 bp (1038 high quality bases) assembled on 2008-08-08
> FMO04811.5prime
AACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAATCCGG
AATCGAGGGACCTGGATTTGAGAAAGGGCGATGTCGAGAGGCCGCACTTC
GAGGCGGTTACCACACTGTCCGACTCGCAGGCGATCCGGAGCGTCGACTT
TCATCCGAATGGAAAGTTGTACGCGGTGGGCTCCAACTCCAAGACCTTCC
GCATCTGCCAGTACCCCGCGCTGTCCAAGCTGAGACATGGACACCAGGCA
GCGGTGTATCCCCCGTCCGTTCTCTGCAAGCGCACGAAACACCATCGGGG
CTCCATATACTGCACCTGCTGGTCACGGGATGGGGAGCTAATTGCCACCG
GATCGAACGACAAGACCATCAAGTACATGCGCTTCAACAACGACACCAAC
CAGCTGGTGGGACACGAGATGGAGCTGAACATGCACGACGGCACGGTGCG
GGACATGTGCTTCCTGGACGACTCGTCCACCAAGTCCCGGCTGCTGGCGA
GCGGCGGCGCCGGGGACTGCAAGATCTACATCACAGACTGCGGAACCGGC
ACTCCCTTCCAGGCCTACAGTGGTCATACTGGCCACATCCTGTCCCTCTA
CAGCTGGAACAACGCGATGTTCGTGTCGGGATCGCAGGATCAAACGATAC
GTTTCTGGGATCTGCGAGTGAATGTCTCTGTGAATACGCTGGATAACGAT
CGAAAGGATGGTGGTCTGGAGAGCTCCGCTGTAACCGCGGTCTGTGTAGA
TCCCACCGGCAGGCTGCTAGTCTCTGGGCACGCTGACAGCTCCTGTACTC
TGTACGACATCCGTGGCAACCGGCCCATTCAGCGCTTCTATCCGCACACC
GCTGAAATAAGGTGCGTCCGATTCTCCCCATCCGCCTACTACATGCTGAC
GTGCAGCTACGACAACTCGATCCGGCTGACGGACCTGCAAGGCGACCTGT
CCACGAGCTGTCCTCCGTGGTGGTGCGGAGCCACAAGACAGGCCATCACC
ATCCGATGGCATCCGACCGAGTTCTCTCATCTCACGTCGGCGACAAGACG
CCATCCTCTGGGCGCTGCCGCCCTCGGCAGCTTTCTAGACATCGTTGGCG
CGCGGCCCAGGTTAGTTGTCATATCATATCATAATCTAATCATAATCCCA
ACTAGCTAGG
FMO04811.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2812-RA | 1325 | CG2812-RA | 153..1197 | 40..1076 | 4960 | 98.9 | Plus |
Ca-P60A-RI | 6306 | CG3725-RI | 5171..5576 | 638..233 | 2030 | 100 | Minus |
Ca-P60A-RI | 6306 | CG3725-RI | 4881..5109 | 863..635 | 1145 | 100 | Minus |
Ca-P60A-RI | 6306 | CG3725-RI | 4600..4825 | 1076..859 | 865 | 94.7 | Minus |
Ca-P60A-RI | 6306 | CG3725-RI | 5644..5803 | 234..75 | 800 | 100 | Minus |
Ca-P60A-RI | 6306 | CG3725-RI | 5958..5995 | 77..40 | 190 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23925807..23926212 | 233..638 | 2030 | 100 | Plus |
2R | 25286936 | 2R | 23926274..23926502 | 635..863 | 1145 | 100 | Plus |
2R | 25286936 | 2R | 23925580..23925739 | 75..234 | 800 | 100 | Plus |
2R | 25286936 | 2R | 23926558..23926783 | 859..1076 | 675 | 93.8 | Plus |
2R | 25286936 | 2R | 23925388..23925425 | 40..77 | 190 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:32:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2924..2967 | 357..400 | 121 | 75 | Plus |
FMO04811.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:14 Download gff for
FMO04811.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2812-RA | 149..1202 | 33..1082 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:12:23 Download gff for
FMO04811.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2812-RA | 146..1199 | 33..1082 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:32 Download gff for
FMO04811.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2812-RA | 149..1202 | 33..1082 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:32 Download gff for
FMO04811.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23925582..23925739 | 77..234 | 100 | -> | Plus |
2R | 23925809..23926211 | 235..637 | 100 | -> | Plus |
2R | 23926277..23926500 | 638..861 | 100 | -> | Plus |
2R | 23926561..23926788 | 862..1082 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:14 Download gff for
FMO04811.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19813105..19813262 | 77..234 | 100 | -> | Plus |
arm_2R | 19813332..19813734 | 235..637 | 100 | -> | Plus |
arm_2R | 19813800..19814023 | 638..861 | 100 | -> | Plus |
arm_2R | 19814084..19814311 | 862..1082 | 93 | | Plus |