FMO04812.5prime Sequence
456 bp (456 high quality bases) assembled on 2008-08-08
> FMO04812.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGTACCGGTAGA
AAGTTGTGGAAATACATTCCGAGCAATTTTCAGTGGAAGAATAGTACCTG
CGAAATACAGGTTGAACAATAAGCAATTTATGGAAAGGAAACCAAGTATA
CCAAAAATCAGGCAGGTCAGCAGTCTTGGAAGTCAATTCACTTTTCCCAA
TATAGCGGATCTATTTTGCAATGCCGTCTCCATTCACAATGACTATTGTA
AATTGCATTTTATAAACGAAAAGTTGCAATTCCATTTAAATGGAATGTTG
GAAAGTAAAGATGCTTCAGCGATTTACTATTTTAAGCAACATATTATTCT
AAACTCGGATCAACTGGAATCTGCATCCAAAAATTATGACATGACCTTTC
ATACAATAATGAGAAGGTGGGAAACTGACCGGAAAACGGCAAGCTTTCTA
GACCAT
FMO04812.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17490-RC | 1394 | CG17490-RC | 124..525 | 37..438 | 2010 | 100 | Plus |
| CG17490-RD | 1342 | CG17490-RD | 51..457 | 32..438 | 2005 | 99.5 | Plus |
| CG17490-RF | 2953 | CG17490-RF | 1665..2039 | 39..413 | 1875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22539952..22540324 | 39..411 | 1865 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:58:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 42..82 | 292..251 | 108 | 76.2 | Minus |
FMO04812.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:29 Download gff for
FMO04812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17490-RC | 116..531 | 25..444 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:15:33 Download gff for
FMO04812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17490-RD | 43..461 | 25..444 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:40 Download gff for
FMO04812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17490-RC | 116..531 | 25..444 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:40 Download gff for
FMO04812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22539950..22540324 | 36..411 | 99 | -> | Plus |
| 2L | 22547540..22547572 | 412..444 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:29 Download gff for
FMO04812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22432682..22433056 | 36..411 | 99 | -> | Plus |
| arm_2L | 22440272..22440304 | 412..444 | 93 | | Plus |
