FMO04814.5prime Sequence
1024 bp (1024 high quality bases) assembled on 2008-08-08
> FMO04814.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTCGTGCGGCTC
TGGGTCCGCAGCTTCCATAAATATGATCTTCTCATCGCCATCGGACTGAT
CACTCTCATCGTGTACCTGTGTCTGCCCTTCCGGTTCGCATCGCACTACG
ACTACATCGAGGAATCAAAGATCGAGGGGGCTCTGGTGCCGCAGGTGACC
AGAAATGTCTCCCAGCAGGAAGTTTTCGAATGCACCTACTCGGAGATCAT
TGCCGAAAACCGGTTCGTCTACCACCTGGCCCATTACCATGACGCGGTGC
AGAGGGGCGCGGAGATCCGTCCTGGCGGCGAGTTCCGTCCGGAAGGATGT
CAGGCTCGCTACAGCACCGCCATCATTGTGCCGTACAGGCAGCGGGAGGA
GCAGCTGCACGCCTTCCTCACGTACATGCACAATTACCTGCCGCAGCAGC
TGATCCACTATCGGATTTTCCTGGTCGAACAGTTCGATCATAAGCCGTTT
AACAGGGCGATGCTCTTCAACATTGGCGCCCAGGTGGCTGCGGAGTATGG
ATTTCCCTGCCTCATCCTTCATGACGTGGACCTCCTGCCACTGAATTCGG
GTCAAATATATGCCTGCTCCGAACGTCCACGGCACATGAGCTCTGCCCTG
GATCACTGGCGATTCCGACTGCCTTACCGCGGTCTTTTCGGCGGCGTGGT
GGCCATCAACACCGCCCAGTACCAGCAGATCAACGGCATGTCCAATCTGT
ATTACGGCTGGGGCGGAGAGGACGATGACCTCTACGAGCGCCTGCAGGCC
CTGAATATCGACATTTGCCGATTCGCAATGGAGTTCAGTAAGTACACCAT
GCTGAAGCACAAACAGGAGCAGCCGAATGCCAATCGCGTGGCACTGCTGA
GATCGGCGACTCTGCGCCAGCACGCGGATGGACTCAACTCACTGGTGTAC
ACGGAAATGGAGCGGCGAATGCACAAGTTTGTCACGCACATCCTGATTGA
ATACCGCAAGCTTTCTAAGACCAT
FMO04814.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| beta4GalNAcTB-RA | 1349 | CG14517-RA | 90..1054 | 36..1000 | 4765 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29032955..29033919 | 1000..36 | 4750 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:32:22 has no hits.
FMO04814.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:19 Download gff for
FMO04814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beta4GalNAcTB-RA | 90..1058 | 36..1005 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:13:01 Download gff for
FMO04814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beta4GalNAcTB-RA | 90..1061 | 36..1008 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:38 Download gff for
FMO04814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beta4GalNAcTB-RA | 90..1058 | 36..1005 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:38 Download gff for
FMO04814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29032951..29033919 | 36..1005 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:19 Download gff for
FMO04814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24858673..24859641 | 36..1005 | 99 | | Minus |
