FMO04820.5prime Sequence
883 bp (883 high quality bases) assembled on 2008-08-08
> FMO04820.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCACTTTGG
AAGACAAACTATTGGGCGAGAAACTTGAGTACTACTGCAGCAGCAGCGAG
GGCGAGGACAATGGTGACGAGGGAGGCGATAATAAGGGGGCATCCGGGAA
ATCCCGATGCTCCGGTCTGACCATCGACACAAATCCGGATGCGACTCCGG
CTGGTGGATTCCGGCAGCAAAGCTCAACGAACACGGGTCCCAAGGGCGTT
GTAAAGGACTGGCAGAGATTCAAGCAGCTCGAGGCGGAGCGACGGGATGA
AACCGAACGTCAACGTCTGGCGCTGGCCAAGAAGCTCACCATTACGGCGA
CAACGTCGGCGGAGGACGAGGAACGCAAGCGGCAGGAGGAACTGGACGCC
GAGCTGGACGAACTGATGAGCGAGGACTTCCTGCAGCAGTACCAGAAACA
GCGGATGGCCGAGATGCTGCGCCAGACGGGGCACCACCAGCAGTTTGGCC
AGGTGCAGCAGTTGACCAGCCACGAGGAGTTCCTCGCCTGCGTCGAGCAG
GAGAACAAGCACACCACCATCATCATCCACATATACGAACGACAATTGGC
CGCCTGTGCCACGCTGAACAAATGCCTTGACAGTCTGGCCAGCGATTATC
CGTCCATTAAGTTCGCCAAGATCTGCAGTTCCGTGGCCGGAATGAGCAGG
GACTTCCGCACCAAAGGATTGCCCGCCCTACTGGTATACAAGGCCCAAGC
GGTCATCGGAAACTTTGTGCGGCTTACCGATGACCTCAGCGATGACTTCT
TCGCCTCCGACGTCGAGAGTTTTCTGATTGAGCACGGCATTATAGTGGAC
AGAGCTCTGTACAATGCAAGCTTTCTAGACCAT
FMO04820.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:29:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7650-RA | 1680 | CG7650-RA | 102..930 | 37..865 | 4145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:29:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15609457..15610285 | 865..37 | 4145 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:29:49 has no hits.
FMO04820.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:36 Download gff for
FMO04820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7650-RA | 98..941 | 30..878 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:09:33 Download gff for
FMO04820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7650-RA | 100..935 | 30..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:30 Download gff for
FMO04820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7650-RA | 98..941 | 30..878 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:30 Download gff for
FMO04820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15609446..15610289 | 36..878 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:36 Download gff for
FMO04820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15602546..15603389 | 36..878 | 99 | -> | Minus |
