FMO04836.5prime Sequence
1071 bp (1052 high quality bases) assembled on 2008-08-08
> FMO04836.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCTGGACCTA
TACAGACGCACGGTGGCGCGGTTTCCTCTGGGCAGTGTCAGCTATATGTT
CGCCTACGGATCCGGCGTCAAACAGCAGGAAGGCTATGGAAAAGTCGGCA
ATGGAAACAACCTGCGTCCTCCGCCGGGAACCGTTGTGGATCTGGTCTTT
TGCGTTCGTGATGCTAGGGGCTTCCATGCGGAGAACCTGCACCGTCATCC
GGACCACTATTCCGCCCTTAGGCACCTGGGACCGAACTTTGTGGCCAAGT
ATCAGGAGCGTTTGGGTGCGGGTGTCTATTGCAACACGTTGGTGCCTCTG
CCAGATGTGGGCATTACCATAAAGTACGGCGTGGTGTCGCAGGAGGAGCT
GCTGGAGGATCTGCTTGACTGGCGGCATCTTTACTTGGCAGGAAGGCTGC
ACAAACCAGTGACGAATCTGGTCAATCCTTCTGATAATCCTCCCCTCAAG
GCTGCGCTGGAGAGGAATCTTGTATCCGCGCTGCAAGTGGCTCTGCTACT
TTTACCAGAGAAGTTCACTGCCTACGGACTTTTCCACACCATCGCCGGAC
TGAGTTACAAGGGCGATTTCCGTATGATTTTCGGGGAAAACAAACAGAAA
GTGCACAACATAGTTAGTCCGCAAATCAATGACTTCTTCGCCCTATACCA
ACCCTCCCTGGGACAACTTTCCGACTATGTGGCGGTAAACATGAAGGGCC
AGGAACCAGGGAGCCGGAAACCAGCCATAATCTTCGAGCACGACAAATCC
TCATCGGCTACATGCCAACACCTGCGACAGTTGCCCCGAGAGCTTCAGAA
GCGATTGCAGCGAAATGCCGCCTGTCGTGGCGACTACACCCAGGTGGTGA
ATCACCTATCCATGGCCTCCCAGCTTCCGGAGTGCTGCAGCATCCGTCAA
CGACATTGTGTGCGCAGCAGTGTCACGCATCGATCAAAAATATCCCAGTG
CTGGCATTCTCAAGTCATGGCGTATAGCTATCGCAAGCTCAAAAGACATC
GCTGTGCAAGCTTTCTAGACA
FMO04836.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33331-RA | 1284 | CG33331-RA | 127..1151 | 39..1055 | 4910 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14886582..14887599 | 39..1049 | 4725 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:24:30 has no hits.
FMO04836.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:12 Download gff for
FMO04836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33331-RA | 101..1139 | 31..1064 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:16:48 Download gff for
FMO04836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33331-RA | 101..1135 | 31..1060 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:41 Download gff for
FMO04836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33331-RA | 121..1159 | 31..1064 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:41 Download gff for
FMO04836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14886576..14887614 | 31..1064 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:12 Download gff for
FMO04836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10712298..10713336 | 31..1064 | 98 | | Plus |
