Clone FMO04839 Report

Search the DGRC for FMO04839

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:48
Well:39
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04839.5prime Sequence

227 bp (227 high quality bases) assembled on 2008-08-08

> FMO04839.5prime
TAACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGAAACC
TTGCAGTTATCGATTCGTCTCGCTCATTGCGCAATGAAAAAAATGCAGCG
GGGGCGGAGGATACGAGAGAGCCTCTCTCTTTGTGAGACACCTGCAGCGA
TAGGAAATGCAAATCCGCCTTCCACTTTCCAGCTCGAAAGTTCAAAGTTC
ACATGCAACGCAAGCTTTCTAGACCAT

FMO04839.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 20:32:46 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12590064..12590233 40..209 850 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:32:45 has no hits.

FMO04839.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:15:06 Download gff for FMO04839.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30055-RA 762..941 40..221 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:50 Download gff for FMO04839.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12590064..12590243 40..221 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:50 Download gff for FMO04839.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12590064..12590243 40..221 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:34 Download gff for FMO04839.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8477569..8477748 40..221 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:34 Download gff for FMO04839.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8477569..8477748 40..221 97   Plus