FMO04844.5prime Sequence
1201 bp (1071 high quality bases) assembled on 2008-08-08
> FMO04844.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGAAAGAA
GCTGGATGTGGTTGTCTTCGGGACGGCAAACATCGAATATATAACATATG
TCCCGGAATTGCCGAAACCCGGTGAACTTGTCGCCGGAACGTACATGGAG
ACCTGTTTCGGTGGCAAGGGAGCCAATCAGTGTGTGGCAGCTGCCAAATT
GGGGGCCTCCACCGTCCTGGTCGCCAAGTTGGGCAAGGACGAATCGGGCG
ATGACTACCTAAACCACCTGCAACAGCACGAGGTTGATGTGACGCACGTC
CAGCAGGTGGAGAACAATCCCACGGGCATGAGTGAAATCGCGGTTTCTGA
GAATGGAGATCAGTACAAGATCAACGTGGCTGGTGCGAATGTATTTCTCA
CGGCCAAGGATGTGACCCGGGCTAAGAAGTCCTTTCAGGATGCGAAGGTG
CTTCTCTGCCAACTGGAAACGGATATGAATGCCACCATGTGTGCGTTGCG
TCAGTTCAAGGGGGTTTCCCTGCTCCACATGTCGCCAATGCGAAAAGATA
TTCCAAATGCCATGATTGGCTTGCCTACTATTCTGGTTGCGAATCAAGAG
GCAGCTGCCAACCTAACCGATATGGAAGAAGTGTTAACCCCTGATCAGGC
GCGAAAAGCAGCTGAAACTCTTATCGCAAAGGGAGCCAAGAGCGTGATCA
TTACCATGGGCGAGCAAGGAGCCGTTTACATGTCCAAGAAGAGCAAAGAT
ATGTGCACCCATGTGCCCGCCTCCGATGTGCCGCACTTGGCCGATCCCTC
GGGTGCCGGTGATGCCTTTATGGGCAGCTTGGCCTATCACATAGCTCGAT
TTCCCAAACTGTCCACAGAACATCATATCAGTGCGGCACACTCCTGCGCC
GCCTACTCCATGGGCCGCCGCGGCACTCAGCCAAGTTTCCCGGGCAAGGA
AAGCGCCAAAAGTGACCTATGCTATTCGACGCCCCACGTTTAGTGTCATT
CCACCTTCTAGTCCGCACATGAAGATGATATATGTAACAAGACGCCACCG
CCTTCAATGTAGTCCCTACGCCGAGAGCCACACTCCCAAAGGAGTTGTGG
AAGACGCATACTTGCCCTCTCCACGAGATCCGGTGTGGAGACCTCACAAG
ACTCCAGGACCTCGAGCATGACCTCCAGTGAACCTCTCCAAGCTCTGCGG
G
FMO04844.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17010-RA | 1413 | CG17010-RA | 97..1169 | 40..1104 | 5075 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12356646..12357626 | 96..1072 | 4595 | 99.3 | Plus |
| 2L | 23513712 | 2L | 12356537..12356592 | 40..95 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:16:21 has no hits.
FMO04844.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:24 Download gff for
FMO04844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17010-RA | 93..1175 | 35..1108 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:09:52 Download gff for
FMO04844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17010-RA | 93..1175 | 35..1108 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:53 Download gff for
FMO04844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17010-RA | 93..1175 | 35..1108 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:53 Download gff for
FMO04844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12356533..12356592 | 35..95 | 96 | -> | Plus |
| 2L | 12356646..12357668 | 96..1108 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:24 Download gff for
FMO04844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12356533..12356592 | 35..95 | 96 | -> | Plus |
| arm_2L | 12356646..12357668 | 96..1108 | 98 | | Plus |
