FMO04845.5prime Sequence
1196 bp (1024 high quality bases) assembled on 2008-08-08
> FMO04845.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATGTGGATTC
AAAAGAACCCATTTTTAGGGTTATTGCTCTGCAGTTTTTTGGCATTTTTC
CAGAGTACATATGCAGAGGTTGGAAAACTGGTGTGCTTCTACGATGCGCA
GAGTTTTGTGCGTGAAGGCCCCGCCCAAATGTCGCTGGCTGAACTGGAGC
CCGCTCTACAGTTTTGCAACTTTCTGGTCTACGGCTATGCGGGCATTGAT
GCCGTAACCTATAAGATCAAGAGTTTGGATCCTTCGTTGACCAATGATCG
TCAGCATTATCGACACATTACCGCTCTGCGCAAAAAATATCCGCATGTTC
GCTTCCTGCTTTCGGTGGGCGGCGATCGGGATGTGAACAGCGAGGGCGTG
GCAGATAGTGACAAGTATCTAAGATTACTGGAACAGTCGGAGCATCGGAA
AAGCTTTCAGGCAAGCGTTTTGGCGGAACTGAACAACAACGGCTTCGATG
GCATCGATCTCGCCTGGCAGTTTCCCAAAAATAGGCCCAAACTGCAGCAG
GGCGTGTTTAAGAGGGTATGGGGATCGTTACGTGGCTGGTTTAGTTCCTC
ATCGGTGGACGAGAAGTCCGAGGAGCATCGTGAGCAGTTTGCCACACTTC
TCGAAGAGCTGCAATCCGATTTGCGACGCGGTGGCCAACTGCTAACCGTC
AGTATGTTGCCACATGTTTCAGCGGAACTCTTTATTGATGTTCCAAAGGT
TCTAAGTAACGTGGACTTCGTCAACCTGGGCACCTATGACTTCCAAACGC
CGGAACGCGATCCCAAAGTTGCAGATCTGCCCACGCCATTGTATGCCATG
TACGATCGGGATCCCAGTCACAATGTGCAGTACCAGGTGCAGTATTGGAT
GAACCAGACATCCGAAATCAGTGTCCACAAACTGCACGTGGGAGTGACCA
GTTATGGTCGAGCTTGAATATGACCCGAAACTCCGGCATCACCGGCTATC
ACATTCGGCGGCAATGGAGCTGCACGCAGAGCAAACTGTACGCAGATGCT
AGCTGCGGAGATTTGTGATTGCTGCACAGCAACCAGAATCGCTAGGTCCC
ATCTGCGCAAAGTGGCGAATCACAGCCTTGGCTCTATGCTACGACCGGAG
TCAGGAAAATGCCATGGTTGCTCAGGGAATCCTTGTACAGCGCGCC
FMO04845.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idgf5-RA | 1495 | CG5154-RA | 42..1144 | 37..1115 | 4930 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18393892..18394454 | 166..728 | 2815 | 100 | Plus |
| 2R | 25286936 | 2R | 18394521..18394793 | 729..1000 | 1315 | 99.6 | Plus |
| 2R | 25286936 | 2R | 18393707..18393838 | 37..168 | 660 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:05:20 has no hits.
FMO04845.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:01:57 Download gff for
FMO04845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idgf5-RA | 35..1006 | 27..1000 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:10:39 Download gff for
FMO04845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idgf5-RA | 39..1010 | 27..1000 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:48 Download gff for
FMO04845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idgf5-RA | 35..1006 | 27..1000 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:48 Download gff for
FMO04845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18393700..18393837 | 27..167 | 97 | -> | Plus |
| 2R | 18393894..18394454 | 168..728 | 100 | -> | Plus |
| 2R | 18394521..18394793 | 729..1000 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:01:57 Download gff for
FMO04845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14281205..14281342 | 27..167 | 97 | -> | Plus |
| arm_2R | 14281399..14281959 | 168..728 | 100 | -> | Plus |
| arm_2R | 14282026..14282298 | 729..1000 | 99 | == | Plus |
