FMO04847.5prime Sequence
277 bp (277 high quality bases) assembled on 2008-08-08
> FMO04847.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGCGCGGTA
CCATTATGGTGTGCTTGGAACCGCCATCGTTTACTTCAAAGGACTTGGAC
ACCCGTTTCTCCTCCTCGGGATCTTCCACATCACGCTGCACCAAATCGAA
ATCAAATTCATCAAAGCGAATTCTTCGCAGCTCCGGTTACACAGAGCTGA
ACAGCAACTCGACTACTCTGCTGTCCAGCGAGGACGAACTTACTCCGCGT
CAGCGCCTCGCAAGCTTTCTAGACCAT
FMO04847.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9203-RA | 2349 | CG9203-RA | 1974..2057 | 112..195 | 285 | 89.3 | Plus |
| CG9203-RA | 2349 | CG9203-RA | 2096..2146 | 207..257 | 210 | 94.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5243776..5243997 | 38..259 | 1110 | 100 | Plus |
| X | 23542271 | X | 15473096..15473179 | 195..112 | 285 | 89.3 | Minus |
| X | 23542271 | X | 15473007..15473057 | 257..207 | 210 | 94.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:06:42 has no hits.
FMO04847.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 23:02:50 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:15:05 Download gff for
FMO04847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14033-RA | 1065..1291 | 31..259 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 20:38:28 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:28 Download gff for
FMO04847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5243767..5243997 | 26..259 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:50 Download gff for
FMO04847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5243767..5243997 | 26..259 | 97 | | Plus |
