FMO04849.5prime Sequence
738 bp (690 high quality bases) assembled on 2008-08-08
> FMO04849.5prime
AACTTATCAGTCGACATGGACAAGCGCGTAACAGTCCTGCTGCCCAATGG
TCGGCGGCAGAATGTGAACGTGACGGCCAACATGACGCTGTTGGAGATTC
TGGAGACGGCCTGCTTCAAGCACGGCTACGATGCGGAGGAGCACTGCCTC
AAGTTTCACAACAAGGTGGTCGGATTGACGCAACAGTTCCGTTTTAGTGG
CCTGCCTAACAACTGTGTCCTGGAGATGGAGCAAACAGAAAAGCGGCGCA
CACTGAGTAACGTTCTTGTCTGCGTCCAATTGAACGACGGTTCCCGCCAG
CAAGGGGACTTCTCGCCCAACGACACCATATGGCTGGTGGTCGAGAAGCT
TTGCGAAACACATGTAAAGGCTTACGAAAGCCCCGTCATCATCTACATGC
GCAGCGAGGTCATAGGACATGAGCAGATGCGACAGACCACTCTTAAGTCC
CTAGGAATCCTCGAGGGTCGTGCCATGATGCGTCTTATCGACAAAAAACC
CGAGGACCTTAAGACCCAGGCAAATGTGTATAAAGCTCCCGCTGTCAAGC
CTCGGGTGGACAATGACGACCAGCCCAGTACCTCCCGCTCTGCAATGGCA
GCTGGTGGCAACGGAGGAGGAGGTGGATTTGCTCTTACCAGCAACATGAT
CAAGAATTTTGAAACGCACGGCTCCTGAAGAAAAGGCCAGCGGTTAGCGA
ACCACCCAAGCCCTTAGGGGAATCCAATCAGAGCAGCA
FMO04849.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33722-RE | 3544 | CG33722-RE | 104..825 | 16..738 | 3500 | 99.2 | Plus |
| CG33722-RD | 1585 | CG33722-RD | 104..825 | 16..738 | 3500 | 99.2 | Plus |
| CG33722-RB | 1547 | CG33722-RB | 66..787 | 16..738 | 3500 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8244213..8244925 | 16..730 | 3430 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:24:07 has no hits.
FMO04849.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:14 Download gff for
FMO04849.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33722-RC | 97..824 | 8..737 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:12:30 Download gff for
FMO04849.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33722-RB | 59..786 | 8..737 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:47 Download gff for
FMO04849.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33722-RB | 59..786 | 8..737 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:47 Download gff for
FMO04849.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8244206..8244933 | 8..737 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:14 Download gff for
FMO04849.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4069928..4070655 | 8..737 | 98 | | Plus |
