FMO04850.5prime Sequence
1212 bp (1027 high quality bases) assembled on 2008-08-08
> FMO04850.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGACCTGCAA
TTGGACAGCGAAAGCTATTGGAACCGATCCTCTCGCGCAGCGTTCAGCTT
CGACGACGAAGACGAGGTGGACCTCGCCCCGGATCTGGTCAGCAATGGCA
TCCTCGCCGACGACACCATTTCGGAGGCCAGCTTCAATAACAGTGTCGCC
CTGAATCTCTCGATCAAATCCATTCTGAGCGAGGAGGCATTGAAACTGGT
GCTGCAGGAACAGGCGCTGGACGACAGGGTCCTGCCCAAGGGTGTCTCGC
CGGAGGAGGAGCTGAAGCTGCTGCGCCGACAGCTTCAGAGCACCCTGTAC
AGCCCCAATCTAGAAGCCACTGCACAGAAGCTGCTGCAAGGAAAGACTGC
GCCCTTGGAGATGTTCAAGTCGCTGCATGAGAAGCAGCAGCTGCTGGACA
CCCTGATGGCACAAGGTGGTGGGCATGCCGTCATTACAGTGTTGCTCTTC
CTCAAGAGAACTCTGAATACCACGCAGTTTCATGGCATTCTGAGGGAGAG
ACCCAAGGCCTTGGAGCAGTATCTGAGTTACCTGAAGGAAAGTGGCGACC
TGGCGGGCCATATTGAGCTACTGCAGCTATTTGGACGCCACCAGGAGGCG
GCTCTTAAGCAGTTTCAGGCAGCGCTCGCTTCCGGAGATACGAGCACCAG
GAAGAAACACCTCCAGCTTTTGGTGGATGCCTATGCCACAGCGGGAGTGG
GTGTAATACCTCTCTACGAGCAGGTTTTTCACGCTGCCCTCAAGATGCAG
CAGCTAATGGAGAAGGATAGCGCGCTCGGCAAGCTGCTTCGGGATCACCC
ACTCCAGTGGAAGTGCTCTATGCTTGCTGCCAGGTGAACAGCAATTGGAA
AGAGCAGGATATGCTCAACCAGTGTCACCTCAGCGTTTTGCCGCCGACCA
GCAAATAATCGCCGGCCCAGTACGAGTGACGGCGCTCAATGAAACGGCGC
AGCACAGGCTATGCGGATCTGGAGTGCATATTTGAGCGGGTGCCAGTGGC
ATCCGCTGAAGACAAACAGTTCCAATCAGCTTCGATCTGAGCTGGCAGGC
TCGGCTGTACGACCTGCAGGCTCCCTCGGAACGTCCTCAGCTATTTCCCT
TCCAGATTGCACCGTGATACTGGCTAGCACGGTTAATCCATCAGCGGCTA
TATATAGTGCAC
FMO04850.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps16B-RA | 1531 | CG18112-RA | 46..1163 | 39..1145 | 5150 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29815306..29816406 | 1128..39 | 4805 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:23:45 has no hits.
FMO04850.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:07 Download gff for
FMO04850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps16B-RA | 46..1165 | 39..1148 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:11:01 Download gff for
FMO04850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps16B-RA | 45..1164 | 39..1148 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:32 Download gff for
FMO04850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps16B-RA | 46..1165 | 39..1148 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:32 Download gff for
FMO04850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29815288..29816400 | 45..1147 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:07 Download gff for
FMO04850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25641010..25642122 | 45..1147 | 98 | -> | Minus |
