FMO04852.5prime Sequence
310 bp (310 high quality bases) assembled on 2008-08-08
> FMO04852.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCAGCACCG
GCGAGATCTGGCTGCAGTGGTTTTCGTGCTGCTTCCAGCAGCAGCGCTCG
CCCTCCCGCCGCCCACACCAACGCCTGCGCATCGACCGGTCCATGATCGG
CAATCCCACCAACTTCGTCCACACGGGCCACATCGGATCCGCGGACGTGG
AGCTGTCGGCCAACCGCCTCAACGCGATCTCCACCCAGATGCAGAGCAAA
GGCGGCTACGAGACCAACTCGATACACTCGCTACATGCCTGCGCAAGCTT
TCTAGACCAT
FMO04852.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spec2-RA | 1748 | CG14672-RA | 494..748 | 38..292 | 1275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5618478..5618727 | 287..38 | 1250 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:25:13 has no hits.
FMO04852.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:18 Download gff for
FMO04852.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spec2-RA | 486..748 | 31..292 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:16:22 Download gff for
FMO04852.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spec2-RA | 487..749 | 31..292 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:27 Download gff for
FMO04852.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spec2-RA | 486..748 | 31..292 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:27 Download gff for
FMO04852.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5618476..5618735 | 31..291 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:18 Download gff for
FMO04852.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1444198..1444457 | 31..291 | 97 | | Minus |
