FMO04853.5prime Sequence
1237 bp (1042 high quality bases) assembled on 2008-08-08
> FMO04853.5prime
CTTCGTATAGCATACATTTTACGAAGTTATCAGTCGACATGGACGAAGGC
GATGAGCTAACCACTTGTCTGTTTTGCACCGAAACATCTGCAAACATCTC
GGTGGCCATTGACCATCTTGACGCCCGGCATAAAGTGAATCTGTCCCAGC
TTCAGCGTAAATTCGAAATGGACCAGTATTCCTTTATCAAACTGATAAAC
TACATAAGAGCCAAAAAGATCAGTGCCGAGCAGTTATTGTCTGCGGAACA
TCCGCTTTGGCAGGATGAGAAGTACCTCCAGCCCGGGGAGTATGAGCCCT
GGCTCTGCTATGACTACGAAGTCCTTAAAACAGACGGCGCTCCGACGCAG
CCCTCGGTTCTGGAGCTACAACAGCGGATTGCTGAGCAGTCGCAATTGCT
GCAGCAGGCCAACGAGGACATGGAACGCATGCGCAACGACTACAAGGCGC
TGCTGCAAAAGGTACATGCTGACGGCGAGCCCAAAGGTTCCGACCAGAGC
GTACCGCGTAACAACGTTTGTCTCGACAACGAATACTTCAAAAGCTACGC
CCACTTTGGCATTCACCATGAAATGCTCAGCGACAAGGTGCGGACCAGCA
CCTATCGCGCGTCTTTGCTCCAAAACGAGGCCGTTGTTCGGGGCAAGACA
GTGTTGGATGTGGGATGCGGCACGGGAATCCTATCCATCTTCGCCTCCAA
AGCGGGTGCAGCTCGCGTTGTCGGCATAGATAACTCGGACATTGTGTACA
CCGCCATGGATATCATCAGGAAGAACAAGGTTGAGAATGTTGAACTGATC
AAGGGACGGCTGGAGGACACAGATCTCCCAGAGACTAAATACGACATTAT
AATATCCGAATGGATGGGCTATTTTCTTTTGTACGAATCAATGCTGGACA
GCATTATCTACGCCCGCGAGAATCACCTCAACCCCAATGGCATAATACTG
CCCAGTCGCTGTACACTCAGTTTTCTTGGCTATTGGAGACGACACGCTTT
ATGCCGATGAGTGAATTCTGGTCTACGTTTACGAGTCGACATGGAGCGAT
CTGCGAAAGCATCAATAAAAGGAGCCACTCATGCAGGTGGTGGAATGCGA
GTTCATGCTGACGACCGAACGGAAGCTACTTCGACATTATGACGTTCGAA
TTTGAACCATTCCAACTTTATCTCACAGTTTAAGCTTAGTTCACCGAAGC
GGGGAGCGAGAATTATTCTGCGCCTTATTTAGTTTTC
FMO04853.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Art3-RB | 1804 | CG6563-RB | 334..1488 | 39..1188 | 5150 | 97.3 | Plus |
| Art3-RA | 1740 | CG6563-RA | 270..1424 | 39..1188 | 5150 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15227999..15229075 | 1113..39 | 4890 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:24:47 has no hits.
FMO04853.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:58 Download gff for
FMO04853.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art3-RA | 262..1365 | 29..1128 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:10:41 Download gff for
FMO04853.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art3-RB | 357..1460 | 29..1128 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:13 Download gff for
FMO04853.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art3-RA | 262..1365 | 29..1128 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:13 Download gff for
FMO04853.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15227980..15229083 | 29..1128 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:58 Download gff for
FMO04853.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11053702..11054805 | 29..1128 | 97 | | Minus |
