FMO04855.5prime Sequence
294 bp (294 high quality bases) assembled on 2008-08-08
> FMO04855.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGCTCTCAGC
AGTATTGTTGGCCATCGCGCTGCTTGCCCTCTCGCTGGTCCAGTGCCTCG
GCCTGCCCGATCCCAGCACCAAGTGCGTCATGGAGTGCGACACGCAGGAG
TACCGATCCATTTGCGCTGCGGACGACAAGGGCTCCACCAAGACCTATCG
CAATCTGTGCGTGATGAAGACGGAAAATTGTCTCCAGAATGCAAACTTTC
AAAAGATCAGCGACAAGGAGTGTCCGGCAAGCTTTCTAGACCAT
FMO04855.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17278-RA | 1934 | CG17278-RA | 1464..1705 | 35..276 | 1180 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21021405..21021584 | 244..65 | 885 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:59:17 has no hits.
FMO04855.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:46 Download gff for
FMO04855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17278-RA | 1464..1712 | 35..283 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:09:28 Download gff for
FMO04855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17278-RA | 1464..1712 | 35..283 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:52 Download gff for
FMO04855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17278-RA | 1464..1712 | 35..283 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:52 Download gff for
FMO04855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21021405..21021584 | 65..244 | 99 | <- | Minus |
| 3R | 21022671..21022700 | 35..64 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:46 Download gff for
FMO04855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16847127..16847306 | 65..244 | 99 | <- | Minus |
| arm_3R | 16848393..16848422 | 35..64 | 100 | | Minus |
