FMO04859.5prime Sequence
298 bp (298 high quality bases) assembled on 2008-08-08
> FMO04859.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGACCACGAACA
GCAGCTTCTTCGATGAACACATCGCCATGATATACTCCAACCTGATGGAC
CAGTACATGCCCGAGTACTTCAAAAGCTTTGAGTACACGCCATGGGTTTT
CTCCCTGCTGGGATCGGTGGTAATTGGACTGAGTGGCATATTCCCGCTGA
TCATCATTCCCACGGAGGAGAAAATGGCTAAGGAGGGATACAAAGATCGT
AAGTCACATGCGTACGAAAAGTATATCAATGCAAGCTTTCTAGACCAT
FMO04859.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zip99C-RJ | 1638 | CG7816-RJ | 314..524 | 38..248 | 1055 | 100 | Plus |
| Zip99C-RI | 1709 | CG7816-RI | 385..595 | 38..248 | 1055 | 100 | Plus |
| Zip99C-RH | 1476 | CG7816-RH | 152..362 | 38..248 | 1055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29865025..29865267 | 280..38 | 1215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:57:20 has no hits.
FMO04859.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:27 Download gff for
FMO04859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7816-RH | 143..367 | 30..256 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:13:05 Download gff for
FMO04859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7816-RE | 200..424 | 30..256 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:45:21 Download gff for
FMO04859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zip99C-RH | 143..367 | 30..256 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:45:21 Download gff for
FMO04859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29865018..29865262 | 43..288 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:27 Download gff for
FMO04859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25690740..25690984 | 43..288 | 98 | -> | Minus |
