Clone FMO04866 Report

Search the DGRC for FMO04866

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:48
Well:66
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04866.5prime Sequence

365 bp (365 high quality bases) assembled on 2008-08-08

> FMO04866.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGATATAAG
ATTCAATATCTCTCAAATTTATATTATCCTATGCACTTCTTAAAGCTTAT
TTTGGGGATTCAAAAGATTCTTGTTTACTTTTTGGCATGCAATTCTAAGG
TTTTCAACGATTTTCTTCCAGTGCAGCTGCAACTTTTGCCATCGCCTTCA
GTTTCTTCTCCTCTGTCGCCTTTTGGTCTATGCTCAGCTTTGAGCTCAGC
AGTTTTTGGGTTCCAATTCGCCACCCCTAGTCCCAGCCCCACCCCCTCTG
TCACACCCCTAAGCCCTACCCCGTTTCCCCCCGTTCCCCTCTACCCTGCA
AGCTTTCTAGACCAT

FMO04866.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:11:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28985789..28986097 347..39 1545 100 Minus
Blast to na_te.dros performed 2014-11-28 22:11:17
Subject Length Description Subject Range Query Range Score Percent Strand
TART-A 13424 TART-A 13424bp 6066..6202 186..50 117 56.8 Minus
blood 7410 blood BLOOD 7410bp 3226..3286 100..37 106 65.6 Minus

FMO04866.5prime Sim4 Records

Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:23 Download gff for FMO04866.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 28985789..28986100 34..347 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:23 Download gff for FMO04866.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 28985789..28986100 34..347 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:30 Download gff for FMO04866.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24811511..24811822 34..347 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:30 Download gff for FMO04866.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24811511..24811822 34..347 99   Minus