Clone FMO04869 Report

Search the DGRC for FMO04869

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:48
Well:69
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04869.5prime Sequence

532 bp (532 high quality bases) assembled on 2008-08-08

> FMO04869.5prime
AACTTCGTATAGCATACATTATACGAAGTTATCAATCGACATGCCTTTCT
ATATAGCGCTGTTTAAATGTTTTACTTACTATAACACAAAATTTATAATA
GCTTTTCGATCCACATCCTTTTACATCTCAATTCTCTTTCTTTGCGCTTT
CGCAGTTCCCTTTTTCCATGTTAACCCTTTTGGACAGCTGTGGCCTTTCC
CTGTTATTCAGCAGTTGGAGTTGATAAATTTGTCTGATTTGTGGCCGGCT
TTATGCCCTCTTCTTGTTTTCCTTTCTATTACCAACTCCCTGGGCTGCCA
ACTCATGCTCGCCATCCTCATTTCCCCCAGCAAACACTTAACTCATTCGC
AATATGCTGCCAAAATCTCAGTTGGCAAGCCACTAACTCATCTGCTCCCT
CCGCGTTTTTCCGCCCATTTTCCTCATCTTGTTTTTTTTTCCCAATTTGA
TGCTGACGACGTGGAAAAATGTTTGGTAATTATTCCGAATTTGGATAATT
ACAATGGCGCATGCGCAAGCTTTCTAGACCAT

FMO04869.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:58:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9423985..9424458 514..41 2355 99.8 Minus
Blast to na_te.dros performed 2014-11-28 22:58:00
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 6331..6403 180..107 115 63.5 Minus

FMO04869.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:16:54 Download gff for FMO04869.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34339-RB 1878..2357 38..518 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:45:45 Download gff for FMO04869.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9423981..9424461 38..518 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:45:45 Download gff for FMO04869.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9423981..9424461 38..518 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:55 Download gff for FMO04869.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9318014..9318494 38..518 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:55 Download gff for FMO04869.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9318014..9318494 38..518 99   Minus