FMO04874.5prime Sequence
1206 bp (1050 high quality bases) assembled on 2008-08-08
> FMO04874.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGATTGTAATCC
AAGGTTGCAGGTTGGCCAGCAATTATTCGAATTTTTTACCAAGCCGGAAA
AGCCGGATGAGTCTGGTGGCGATGTAGCAGCTCCGTTGCTCTTGAAGAAA
TTCGGCAAGTTGATCCGTTACAACAACGATGATCTGACCGAGCAGGGTGA
CTTGACTTTGGCGGCCATCCCGCGTTACTGGCAAAAATATTTAAAAAGCC
AGGGTCTGAAGCTGCGCATCGATGGCGACGAACTGCTCCCCAGCCCGGTG
GACCGCCTGGAGTTGATGGAGCATTCACGCAAGTGGCGTTTCCCGCTCGC
CGAAATCACTGTGCTGAACAAGGAACGCTACTCTCTGCGTTTCCAGCGCC
ATCCGATTATTGCACATGTGCTTAACTCTGTGCTCACGCTGCGCGGCGAT
TACGGCCGTTCGGCAAATAACAACCAATCGCGCACCATATGCTTGCAGTT
GCAAGCCGTTGTCGGAGCCGTCGATGGCGGGCAGGACTTGCGCCACTATC
GCTTGCAGCAGCTATACAAGATACTGCTGCGCCTGGTTGACTACTCGTCT
TGGCGCCTCGTGGAGCCGAATGACCGCCAGAAGGACACCATCTGTGTGAC
TGTCGAGCTGGAGAAATGCTGCAACGGCAAGCAGCCCGTGGAACATGTGT
GCCTCACATGCGGTCCTGTTTTGGAGCCGATAAATAAGGGCGCCAGCTCA
TTGACTGTTGACGAGTACTTAAAGCTGCGCTGCCAGCACATGGAGCTGAT
GGCCACGCAGCGCTCCGGAATGTGTCCGGTACCAATGAGTAGCCTTGATA
CGCTGACGAAGCGTCTTGCGGCCGCTGCCGTGATTGTGGATCTCTTTGTG
GTGCGCCACTCCAGCGCCGTGAGTGTGGTGCGCAATGGAAGTTGGCATTT
GCAAGGCGCTTCTTACATCTTGTACATTCAGCACGTCTGGAGGCGCTGCT
GCGCAAATTTATATGAGTTACATTGTGCCTATGAGAACTGCCACTGCTGG
ATGAGATCGATTCACGTTCTAGAGGATGATGTTGACTGCAGTGATTATGG
CTACTCTACCTTCGAACCTATGGATTCAATATGATCAATTGACCGATCAT
GCGTCTCACTGCTGGCACTTGTTTGGAACCTGGGGTGTGCCCTTCTGATG
TCACTT
FMO04874.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8097-RB | 1903 | CG8097-RB | 304..1383 | 37..1104 | 5050 | 98.6 | Plus |
| CG8097-RA | 1672 | CG8097-RA | 304..1383 | 37..1104 | 5050 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15583462..15584199 | 37..774 | 3690 | 100 | Plus |
| X | 23542271 | X | 15584324..15584641 | 774..1082 | 1105 | 95.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:31:03 has no hits.
FMO04874.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:55 Download gff for
FMO04874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8097-RA | 294..1385 | 28..1107 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:12:34 Download gff for
FMO04874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8097-RA | 292..1383 | 28..1107 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:50 Download gff for
FMO04874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8097-RA | 294..1385 | 28..1107 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:50 Download gff for
FMO04874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15583452..15584198 | 28..773 | 99 | -> | Plus |
| X | 15584324..15584643 | 774..1083 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:55 Download gff for
FMO04874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15477485..15478231 | 28..773 | 99 | -> | Plus |
| arm_X | 15478357..15478676 | 774..1083 | 96 | -> | Plus |
