FMO04880.5prime Sequence
603 bp (603 high quality bases) assembled on 2008-08-08
> FMO04880.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTGGTCCGACAC
AATATTAATTGTTTTTATATCGGTTTGCACCGCCTTCCTGGGCGAAGGTC
TTACATGGGTGATGGTTTACCGGACGGAGAAGTACCAAAAGCTAAAGACC
GAGGTGGAAAAGCAGAGCAAAAAGCTGGAGCGCCGCAAGGAAATCCATGG
GGACTCCCTGGACAAAGCGGTAAAGAAGAAGATCGAGCGCGACGAGGAAA
AACTGAAAAACAACAACCGCGATCTCTCGCTTGTCAAGATGAAGACCATG
TTCGCCACGGGATTCGCCTTCACCGCCCTGTTGAGTATGTTCAACAGCAT
CTTCGACGGCCGTGTGGTTGCCCAGCTGCCCTTCACACCAATCTCCTGGA
TCCAGGGGTTAAGTCACCGAAATTTGTCCGGTGACGACTATACGGACTGC
TCCTTTATATTCCTCTACATCCTGTGCACCATGTCCATTCGTCAGAACAT
CCAAAAGCTTCTGGGTTTTGCCCCATCGCGCGCCGCAAGCAAGCAGGGTG
TAGGTCTGTTTGGTCCTGCTCCAGGCCAGTTCAAAGCAAGCTTTCTAGAC
CAT
FMO04880.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10470-RA | 701 | CG10470-RA | 100..648 | 37..585 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19049422..19049831 | 176..585 | 2050 | 100 | Plus |
2L | 23513712 | 2L | 19049285..19049364 | 96..175 | 400 | 100 | Plus |
2L | 23513712 | 2L | 19049175..19049237 | 37..99 | 315 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:30:43 has no hits.
FMO04880.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:51:26 Download gff for
FMO04880.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10470-RA | 100..653 | 37..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:15:57 Download gff for
FMO04880.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10470-RA | 97..650 | 37..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:01 Download gff for
FMO04880.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10470-RA | 100..653 | 37..593 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:01 Download gff for
FMO04880.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19049175..19049235 | 37..97 | 100 | -> | Plus |
2L | 19049287..19049364 | 98..175 | 100 | -> | Plus |
2L | 19049422..19049836 | 176..593 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:51:26 Download gff for
FMO04880.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19049422..19049836 | 176..593 | 99 | | Plus |
arm_2L | 19049175..19049235 | 37..97 | 100 | -> | Plus |
arm_2L | 19049287..19049364 | 98..175 | 100 | -> | Plus |