FMO04889.5prime Sequence
1220 bp (1022 high quality bases) assembled on 2008-08-08
> FMO04889.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCACCTGCTG
CGGAGCCTGCGCCAGCTGAATGGCCTCCAAGGAGTGCGCCAAGCTATCCG
GCAGGTGTCCTCGGCGCCCACCAAGCCCGCCGCCCTGCAGTACGAGCGCG
ATCCGCAGCCGCTTTTCACGGATGCCGAAACCCAGCGGCTGCTCCAGTCC
ATGACGCAACTGAACTTGGACAAGGTGTATCGGAAGCGCACGGTGCCGGA
CAACAGCAGCGAAACGAAGTTCATGAGCAACGAGCAGCTGGACAACGAGT
TCCAGAACTTGGTGGTGCGGGCTCAGCAAATTCTGCAAATGCCACCCATT
GTGCAGATCAAAAAAGATGTGGAGCGGGTGATAGCCAAGGATACGGCGCT
GAAGGACTTCGCCAACTCCAAGTTCGTATTCACGGACATCACCTTCGGCC
GACGGCAGTCGGAACGCAAGGTAATCGTCCGGGATATGGACGGAACCTTG
GCCTACGCCACTCTTGATACCACGAAGCGCATGAACCAGTTGTATTTCCC
GCTGGAGGGTCGCCAGTCATATACTCCACGAATGTTCGCGCTGGAGGAGC
TGCTGGCCAAGTGCTTGGCGGAGCACAAGTACGAGTTCATCCTGGATCGA
CTCTTGGTGCAGTACGAGCCACATGAGCCGGAGTTCCACAACATTTCAGC
GCGTGTGTTCGAGCATCTCAACGAGTCCAAGGAGTTCGATCTTCTGCGCT
CCACCCGCCACTTTGGACCCATGGCCTTCTTCTACGCTTGGCACCGCTGC
ATCGACGACCTGCTGTATGACATGATCCGTCGGGATTATCTGCACAATGC
CGTGGAGCTGATTGCTCTGAGCTACAAGCTACACAACATCCCAGTGGAGT
ATCACGCAACGCTGACCGAACTGGGCAAACTGCATGCCACGCCGGGCGGA
AGTGCCCTGGCGGAGCTAAGAAGCGTCTTCCGACGACATGACAATAAGCA
GAACATTGAGCAAGAGATCCATACTGTCATTGACAAGACGGAGCCACGAT
TTCGCCGCCGATGAGATCAGCTGAGTTCATTGAGCAGTACATCGCAGCGA
ACATGCCTGAAGAGTGCACTGGACCTGCCGTGCGACGCTAAGAAGTAACG
AACTGTATGTCTCGTGTTCCAAGACTGAATGCTCACGGGCCTCAAGACTC
TCGGGAAAGCTTTTTCTGTG
FMO04889.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS22-RA | 1341 | CG12261-RA | 95..1203 | 39..1139 | 5160 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27917002..27918071 | 39..1106 | 5040 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:10:38 has no hits.
FMO04889.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:11 Download gff for
FMO04889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS22-RA | 94..1191 | 39..1130 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:10:00 Download gff for
FMO04889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS22-RA | 94..1191 | 39..1130 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:09 Download gff for
FMO04889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS22-RA | 95..1192 | 39..1130 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:09 Download gff for
FMO04889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27916984..27918059 | 21..1095 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:11 Download gff for
FMO04889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23742706..23743781 | 21..1095 | 98 | == | Plus |
