FMO04892.5prime Sequence
263 bp (263 high quality bases) assembled on 2008-08-08
> FMO04892.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCAGATCAAG
TTCCTGTACCTCTTCCTGGCTGTGATGACCATCTTCATCCTGGGCGCCAA
GGAAGCCGATGCCGACTGTCTCTCTGGAAGATACGGAGGACCCTGCGCCG
TCTGGGACAACGAGACCTGTCGTCGGGTGTGCAAGGAGGAAGGACGATCC
AGTGGCCACTGCAGTCCCAGTCTGAAGTGCTGGTGCGAGGGATGCGCAAG
CTTTCTAGACCAT
FMO04892.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Drsl5-RA | 364 | CG10812-RA | 53..261 | 37..245 | 1045 | 100 | Plus |
| Drs-RA | 387 | CG10810-RA | 116..273 | 88..245 | 550 | 89.9 | Plus |
| Drsl6-RA | 387 | CG32268-RA | 60..272 | 39..245 | 455 | 82.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3316833..3317041 | 37..245 | 1045 | 100 | Plus |
| 3L | 28110227 | 3L | 3369671..3369828 | 88..245 | 550 | 89.9 | Plus |
| 3L | 28110227 | 3L | 3314379..3314584 | 40..245 | 445 | 81.1 | Plus |
| 3L | 28110227 | 3L | 3336147..3336359 | 245..39 | 415 | 80.8 | Minus |
| 3L | 28110227 | 3L | 3315784..3315842 | 180..238 | 205 | 89.8 | Plus |
| 3L | 28110227 | 3L | 3335582..3335639 | 245..188 | 185 | 87.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:31:50 has no hits.
FMO04892.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:01 Download gff for
FMO04892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drsl5-RA | 53..266 | 37..251 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:11:04 Download gff for
FMO04892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dro5-RA | 25..238 | 37..251 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:21 Download gff for
FMO04892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drsl5-RA | 53..266 | 37..251 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:21 Download gff for
FMO04892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3316833..3317046 | 37..251 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:01 Download gff for
FMO04892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3316833..3317046 | 37..251 | 98 | | Plus |
