FMO04903.5prime Sequence
1212 bp (969 high quality bases) assembled on 2008-08-12
> FMO04903.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGCCAGACTTC
CAGTCACCGGCAGATGCACCACAGTAGCAATAACAACAACAAGGAGGAAC
CACCACAACCGGCTTCACAGTTTGGAAATCGTCGAACCTCTACCCGCAAA
TCGACTTCGTCTTCGAAACATTACCCCACATTGGTGCAACCATTGCGTAA
GGATGAGCTCTCTCTCCTGCGAGATTCACTTCTGCGCAATGGAAGCATTA
TGCGCAAGAACCCGGAACGTCGTCCGGTAACGATCAGTGAGCTGAAACCA
GTTAATACCGGGCAGGGGACTTCGGGTAGTGTCCTGCCTATTACAGCAGA
GGATGCTGCTGGTGGGAGCAGTAGTAGCATCACCCAACTAATGGCCTTCC
AACTGCCCGTGGATCGAAGTGCCAAGACTGACGACCTGGCTGCCGAATCC
TCGGCTTCAGCAGCAGCAGCTGTGGCGCCCAAGGAGGGGCGCAATGAGTT
TTATATTGTGGGAGATGGCTATCATCGGACGGATCACTGCTACTATCGCA
GTCCCAATGGCGATTTTCACAAACTGCCATCCGACTCCTTTCACAAGATG
TCGGAGGGCTGTTTCGTCCGAATGGCCGATGGGGTCTTCCGTCGCCTGGA
GGTACCCACCAAGGCTCAAATATCCCGAAGATCCAGCAGGGCAGAGGAAA
TAGGCGATGCCACAAGCCAGGGAAATGGAAGTGCCGCCACCAATGTTAAG
AGCCAACTGATGAGATTTCTAAAGCGCTCCAAGAGCCACACGCTCTGCCA
CTATTGCCATGTTGCAGCGGGAAAAGGAGGAGGCCCGAGCGGAACGCAAG
CAACGGCTATCGAACGCCCTGCGGCAGAGATCTAGCGGCCACAATGCAGC
CTCAGCTGCTGCGGCGACTCATCCTACGCAAGCGGTGGTGGTGGTGCACC
GTAAGCAGTCGGACATAGATTGTGGGTGACATGATCGAAACGGCGGCCTG
CCCATGGTGCCACCAGTAAGGCGAAGGCCCAAGCCAAGGAGTCGGCATCA
TCCATGACAGCTCGCCACTCAGGATTTGTACCCCAATGCTGGCTTTCTAG
AACCATCGTTGGCCGCGGCCAGGTATGGTCCTATCCTATCCTATCCAACT
AATCCAACATAGCCTAGGATCGCTGACATGACTGATTCCCAATAATCGGG
ACCGAGGTCTGA
FMO04903.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| par-1-RQ | 3321 | CG8201-RQ | 610..1667 | 36..1077 | 4730 | 97.5 | Plus |
| par-1-RH | 4868 | CG8201-RH | 474..1523 | 36..1070 | 4715 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19464641..19465671 | 36..1054 | 4390 | 97.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:28:03 has no hits.
FMO04903.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:38 Download gff for
FMO04903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| par-1-RQ | 603..1667 | 29..1077 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:04 Download gff for
FMO04903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| par-1-RQ | 569..1633 | 29..1077 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:20 Download gff for
FMO04903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| par-1-RQ | 603..1667 | 29..1077 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:20 Download gff for
FMO04903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19464634..19465671 | 29..1054 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:38 Download gff for
FMO04903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15352139..15353176 | 29..1054 | 97 | == | Plus |
