FMO04904.5prime Sequence
761 bp (761 high quality bases) assembled on 2008-08-12
> FMO04904.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGTGACCTACAG
GCCACCATTGAATTCGTCGTGGAGCTGCACAAGTTCTTCAATGTGGATTT
GTTTCAGCGCGGACTCTACCAGGTGCGCTGTGGCCTGCGTGTTTCACCCC
GCCTACTTGTGCAGGTGGAGACGAGCATTCCGGAAGCCAGTGGACCCGGA
AAACAGAACGGACATGCCAACGGGGCCAACGCCACCGACCACGGCAGCAG
CGATAGCGAGAGGGGGGAGCTGTCGCCGGGGGAAGTGCCACGCCTCCACG
AATCACCGCCGGGGGGCAGCTGCTCATCCGCCTCCGTTATCAACGGCAGC
GGCGCCTCGCGCATCTTCCAGATACTCTACCGCAACGAGGAGGTTCCGCT
GCGCGACATCATCCACTTCAGGAGCCATCTGCTAGTTGACAGTCGTCACC
TGAAGGAGTCCATCGAACGAGCCGAGTTTTCGCTGCAGTTGGAGCTCTGG
TTCGGGGAGCAGAACGGGTCGAGCAGCCTGAACGGCAATGGAGGCGGCAG
TGGGATGGGCAGCTTCTCCGGACCCGCCAGCTCTGCCCTGACACTGGCCT
CCACCAGGAACCTGCAGCTGAACTTTCATCCGGGACGTGGCCTTCACTAC
CATCTGCCTGTGCTGTTCGACTACTTCCATCTGGCGGCCATCAGTGTGGG
CATCCACGCCAGCCTCGTGGCCCTTCATCAGCCGTATATCAAGGCAAGCT
TTCTAGACCAT
FMO04904.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32333-RC | 6339 | CG32333-RC | 425..1133 | 35..743 | 3545 | 100 | Plus |
| CG32333-RB | 1109 | CG32333-RB | 309..1017 | 35..743 | 3545 | 100 | Plus |
| CG32333-RA | 4876 | CG32333-RA | 309..1016 | 35..742 | 3540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1284787..1285114 | 112..439 | 1625 | 99.7 | Plus |
| 3L | 28110227 | 3L | 1287930..1288239 | 434..743 | 1550 | 100 | Plus |
| 3L | 28110227 | 3L | 1283735..1283812 | 35..112 | 390 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:28:06 has no hits.
FMO04904.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:41 Download gff for
FMO04904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32333-RB | 309..1017 | 35..743 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:07 Download gff for
FMO04904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32333-RB | 292..1000 | 35..743 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:22 Download gff for
FMO04904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32333-RB | 309..1017 | 35..743 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:22 Download gff for
FMO04904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1283735..1283812 | 35..112 | 100 | -> | Plus |
| 3L | 1284788..1285110 | 113..435 | 100 | -> | Plus |
| 3L | 1287932..1288239 | 436..743 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:41 Download gff for
FMO04904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1283735..1283812 | 35..112 | 100 | -> | Plus |
| arm_3L | 1284788..1285110 | 113..435 | 100 | -> | Plus |
| arm_3L | 1287932..1288239 | 436..743 | 100 | | Plus |
