FMO04907.5prime Sequence
673 bp (673 high quality bases) assembled on 2008-08-12
> FMO04907.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGCAGATCCC
TGTTTCTAATTCTTTTATTGGGAATCTCCTGCCTGGAGATTTTCCAGGCT
CGCTCTCTTCTGGAGGGGAGAAAACAAAGATTTGTGCGCAGACGCATATC
ACCCGACGATCCTGATCTCGAGATCATCGAGGTCAAGGACGTCTACTACC
GAAAGCGGCCCAAGAAGTTGGTTGTCCAGCTCGATGATGACGAATTAAAC
TGGAAAATTCGCTGTGACTTCGATCCAAGCAATCCGGAGTGTGGAGATGT
AGTGAAGAAACCCGTGGCTCCTATCAGGCCAACCACAACCACCAACCCCA
CCACAACCACTAGCAGAACCACCACCACCACCACAACTGAACCCACAACA
GAACCCACAACTGAACCCACAACTGAACCCACAACTGAACCCACAACTGA
ACCCACAACTGAACCTACAACTGAACCGACAGAAGCACCAGATACAGATG
ATAATATCGAATTGTTCGGCGACAATGAAGAGGACTCTGAGGATCAGGAG
GATCTAGATGATCAAGGAGATCAGGAGTATCAGGAGGTTGACCCCTATGG
CACTTACGATAGCCAAATCCACTCAATTGGGGCTAATGATGAGGGCAACT
GGAATGCAAGCTTTCTAGACCAT
FMO04907.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1468-RA | 735 | CG1468-RA | 23..640 | 38..655 | 3075 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9878820..9879184 | 291..655 | 1810 | 99.7 | Plus |
| X | 23542271 | X | 9878444..9878698 | 38..292 | 1275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:26 has no hits.
FMO04907.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:25 Download gff for
FMO04907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1468-RA | 19..640 | 34..655 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:12:11 Download gff for
FMO04907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1468-RA | 19..640 | 34..655 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:03 Download gff for
FMO04907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1468-RA | 19..640 | 34..655 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:03 Download gff for
FMO04907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9878440..9878696 | 34..290 | 99 | -> | Plus |
| X | 9878820..9879184 | 291..655 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:25 Download gff for
FMO04907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9772473..9772729 | 34..290 | 99 | -> | Plus |
| arm_X | 9772853..9773217 | 291..655 | 99 | | Plus |
