FMO04910.5prime Sequence
742 bp (742 high quality bases) assembled on 2008-08-12
> FMO04910.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCTGACGACCC
AGCAGACCGAATTCAAGATGATGGACAACGGCACCGAGACGCTGGCCGAT
TCTCCTTCGAGTTCCAGCGAGGATCTGAAAACGCTTTCGGATATGGATAT
TCGCAAGCCCGTAACGGAGATTGTTGATTTGCGCCTTAAGCATCCGCTAG
AGAACACTTGGACACTGTGGTACTTGGAGAATGATCGCAGCAAGAACTGG
GAGGACATGCAGAACGAGATTACTAGCTTTGACATGGTCGAGGACTTCTG
GAGTCTCTACAATCACATTAAGCAGCCATCTGAGATTAGAGTGGGCAGCG
ATTATTCTTTGTTCAAGAAGGGCATTCAGCCAATGTGGGAGGATGATGCG
AACAAGTTCGGCGGCCGTTGGGTCATCAATATGGGGCGTGGCTCCAAAGC
GGAGCTCGACAAGCTTTGGTTAGATGTGCTACTCATACTGATTGGCGAGG
CCTTTGAAAACACCGAGGAAGTCTGCGGCGCCGTTATCAACTTGCGCGGG
AAGAGCAACAAAATTTCGATTTGGACCGCCAACGGGCACAACGAGCTGGC
CGTCATGGAGATTGGACTCAAGTTACGGGACCTGCTCGTCCTTCCGCCCC
ACCAACTGCAGTACCAGCTGCACAAGGACACTATGTGCAAGCAGGGATCG
GTGATCAAAGCGGTTTATTGCGTGGCAAGCTTTCTAGACCAT
FMO04910.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF4E-4-RA | 1031 | CG10124-RA | 134..821 | 37..724 | 3410 | 99.7 | Plus |
| eIF-4E-RI | 1793 | CG4035-RI | 1020..1510 | 209..696 | 485 | 73.9 | Plus |
| eIF-4E-RH | 1492 | CG4035-RH | 719..1209 | 209..696 | 485 | 73.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6665166..6665508 | 379..37 | 1715 | 100 | Minus |
| 3L | 28110227 | 3L | 6664434..6664591 | 724..567 | 760 | 98.7 | Minus |
| 3L | 28110227 | 3L | 6665015..6665114 | 478..379 | 500 | 100 | Minus |
| 3L | 28110227 | 3L | 6664847..6664935 | 566..478 | 445 | 100 | Minus |
| 3L | 28110227 | 3L | 9400584..9400752 | 377..209 | 290 | 78.1 | Minus |
| X | 23542271 | X | 1159150..1159337 | 396..209 | 235 | 75 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:14:52 has no hits.
FMO04910.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:29 Download gff for
FMO04910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF4E-4-RA | 124..831 | 27..735 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-12 14:13:03 Download gff for
FMO04910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF4E-4-RA | 124..831 | 27..735 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:13 Download gff for
FMO04910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF4E-4-RA | 124..831 | 27..735 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:13 Download gff for
FMO04910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6664424..6664591 | 567..735 | 96 | <- | Minus |
| 3L | 6664847..6664934 | 479..566 | 100 | <- | Minus |
| 3L | 6665015..6665114 | 379..478 | 100 | <- | Minus |
| 3L | 6665167..6665518 | 27..378 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:29 Download gff for
FMO04910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6658267..6658618 | 27..378 | 98 | | Minus |
| arm_3L | 6657524..6657691 | 567..735 | 96 | <- | Minus |
| arm_3L | 6657947..6658034 | 479..566 | 100 | <- | Minus |
| arm_3L | 6658115..6658214 | 379..478 | 100 | <- | Minus |
